Gene Dfer_5723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5723 
Symbol 
ID8229339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6877356 
End bp6878492 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content58% 
IMG OID644933568 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003090076 
Protein GI255039455 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.871136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGA AACTGAGAAT CAGCGCGGCC AGACGAGCCA CTTTATTAAT ATTTTTGGTG 
TGCGGCATCG GCCTGTCGAG CTGGGCGCCG ATGGTACCTT TTGCCAAAAT CAGACTTGGG
TTGAACGATG CCGATCTGGG TGTGGTGCTG CTCGCATTGG GAGCCGGGGC CATTCTCACC
ATGCCCGTAA CGGGGTTGCT GATCAACAAA TATGGCAGCC GCACGGTCGC GGTGGTGTCG
GCGCTGGTGA TTGCCTCACT CCTTCCCCTG CTCCTGCTGG CCGGCACAGC CTATGAGCTG
GCTGCCGCTC TTTTCGTTTT CGGTGCGGGC ATCGGCTCCA TTGATGTGTC CATGAACGCG
CAGGCGGTAG TAGTGCAGGA GCGCTACGGC AGCCACATTA TGTCGTCGTT TCACGGCATG
TTCAGCGTCG GCGGGCTCAT CGGTTCCATC GGCCTCGGTT TCCTCATCAA AGCGGGGCTG
TCGCCTACTT ACGCCGCCAT CGCGATTTCT GCATTGCTCG TTGTGATCAC CTTCACGCAG
TCGCGGTACC TGCTGCCCCA TTCCGAGGAG GCCAAAATGG ACAGTACGAG CTTTGTATTG
CCCAAAGGCC CGGTGATCCT GCTCGGCATT ATGTGCTTCA TTCTTTTCCT CGCAGAAGGC
TCTTTGCTCG ATTGGAGCGC CGTTTTCCTG CAATTCTCGC GCGGTTTCGA CCCTTCGTTC
TCCGGACTTG GCTATGCCGC ATTTTCAGTG GCGATGGCCA TTATGCGCCT TACCGGCGAC
GGCCTCATTC ATCGCCTGGG CCCGGCCAAA GTGGTGTTTT ACGGGACGTT ACTTGCCGGA
GCCGGATTTA TGGTCGCCGT ACTCATCCCA CCTGCCATTG CTGCATTGGT AGGTTTTGTG
ATGGTAGGGC TTGGCGCTGC CAATGTGGTG CCTATATTCT TCACCGCCGC GGGCCGCATT
CCCAACATTC CGCCGTCGAT CGCCTTGTCG GCCGTGACTA TTCTGGGCTA TTCGGGCCAG
CTGGCCGGTC CTGCGCTGAT AGGCGTGCTG GCCGAGATCA CGTCGCTCTC GTGGGCGCTT
GGGCTGGTTG GGGTGCTATT GTTTTTCGTC GCATTCGGCT ACAAGCACCG CGACTAG
 
Protein sequence
MEEKLRISAA RRATLLIFLV CGIGLSSWAP MVPFAKIRLG LNDADLGVVL LALGAGAILT 
MPVTGLLINK YGSRTVAVVS ALVIASLLPL LLLAGTAYEL AAALFVFGAG IGSIDVSMNA
QAVVVQERYG SHIMSSFHGM FSVGGLIGSI GLGFLIKAGL SPTYAAIAIS ALLVVITFTQ
SRYLLPHSEE AKMDSTSFVL PKGPVILLGI MCFILFLAEG SLLDWSAVFL QFSRGFDPSF
SGLGYAAFSV AMAIMRLTGD GLIHRLGPAK VVFYGTLLAG AGFMVAVLIP PAIAALVGFV
MVGLGAANVV PIFFTAAGRI PNIPPSIALS AVTILGYSGQ LAGPALIGVL AEITSLSWAL
GLVGVLLFFV AFGYKHRD