Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5113 |
Symbol | |
ID | 8228720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6177458 |
End bp | 6178516 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644932961 |
Product | aminotransferase class V |
Protein accession | YP_003089478 |
Protein GI | 255038857 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | [TIGR01366] phosphoserine aminotransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.232116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCT TTTATCCAGG ACCCAGCAAG GTTTATCCAG AGGTCGAACA ATTCATTTCG GAGGCATTTG CCAGCGGTTT GATCAGCGCC AACCATCGCA GCGAGGTCTT TATGCAGTTG CTCGAAAAAA CGATCGCGGA CCTAAAAGCG AAACTGGACA TTCCGGCTGG TTACGAAGTG TACCTCGTGT CGTCGGCCAC CGAATGCTGG GAAATCATCG CGCAATCGCT GCTCATCGAT TCCAGCCTGC ATATTTACAA CGGCGCATTC GGCGAAAAAT GGATGGAATA TACCCACCGC ATTTCGCTGC GGACGAGCGA CGCGGCGTTC GGCCTCAACG AAACGTTGCT CATGGACCGT TCCGCTGTGT TTTCACGCAA TGAACTGATT TGCGTCACGC ATAACGAAAC GTCCAACGGG ACCAAAATAC CCGAGGACTT CCTGCTCGAC ATTCGTAAGA AAGTCGATAA CCTGATCGCC GTGGACGCAA CTTCTTCCAT GGCCGGGGTG GTCTTGCCCT GGGAGAATGC GGATGTGTGG TATGCGTCGG TGCAGAAATG TTTCGGATTA CCGGCCGGTT TGGCGGTGAT GGTCGTTTCG CCGAAGGCTA TCGAGCGGGC GATCCAGGTG GGAGAACGGA AGCATTACAA TAGCCTGCTG TTTATACGCG ATAACTTTTT GAAGTTTCAG ACACCCTTTA CCCCCAATAT CCTCGGTATT TATCTGCTCG GAAAGGTAAT GCAACAGGTC CCGGCCATTG AGCAAACGGA CAAGCAGACC CGCCGGCGCG CGCACGATTG GTATGCATTC CTGCTCGAAA ACGGTTATGA GCTGGTTGTT GAAAACACGG CGGTACGTTC CGATACGGTC ATTGCCGTCA GGGAAACGAA AGAGCGGATT TCGGAGCTGA AAGGCGCTGC GAAAAGGGAG GGCATCACGC TTGGTAACGG CTATGGCAAA GAGAAGGATA CCAGCTTCCG GATTGCCAAC TTCCCGGCTA TCAGCGATGC GGAAATCGCG ACGTTGAAGG CTTTTTTGGT GAAAATGGCC GCGTATTGA
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Protein sequence | MITFYPGPSK VYPEVEQFIS EAFASGLISA NHRSEVFMQL LEKTIADLKA KLDIPAGYEV YLVSSATECW EIIAQSLLID SSLHIYNGAF GEKWMEYTHR ISLRTSDAAF GLNETLLMDR SAVFSRNELI CVTHNETSNG TKIPEDFLLD IRKKVDNLIA VDATSSMAGV VLPWENADVW YASVQKCFGL PAGLAVMVVS PKAIERAIQV GERKHYNSLL FIRDNFLKFQ TPFTPNILGI YLLGKVMQQV PAIEQTDKQT RRRAHDWYAF LLENGYELVV ENTAVRSDTV IAVRETKERI SELKGAAKRE GITLGNGYGK EKDTSFRIAN FPAISDAEIA TLKAFLVKMA AY
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