| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4433 |
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| Symbol | |
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| ID | 8228036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5350640 |
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| End bp | 5352202 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644932279 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003088799 |
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| Protein GI | 255038178 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.320456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTAACG AATTACTAAT CAATTCTACT CAAAAGGGAG AGCGTATAGC CCTTTTGCAG
GATAAACGTC TTTTAGAATA TCACGTAGAA ACACCGGATC AGAGCTTTAC CGTGGGTGAC
ATTTACCTGG GTACAGTTCG AAAGCTGGTG GCAGGGCTCA ATGCTGCCTT TGTTGACGTC
GGTTTTGAAA AGGATGCATT CCTGCATTAC CTCGATTTGG GGCCCAATAT CAACTCGCTG
AATAAGCTCA CCAAGGATGT AATTGCCAAG CGCGCGCATT CCGGAAACTT GAAGAATTTC
AAGATGGAGC CGGAAATCGA GAAGCTTGGA AAAATCGATA AAGTCCTTTC CAAAAACCAG
CCAATCCTCG TCCAGATCGT TAAGGAGCCA ATTTCTACAA AGGGCCCCAG ACTTTCCTGC
GACATCTCGA TTGCCGGCCG GTATATTGTA CTTGTCCCAT TCTCCAATTC AGTCAACCTG
TCCAAAAAGA TCACCGACAA GCAGGAACGC AACCGCTTGC AACGGCTGAT GTCTTCCATT
AAGCCTCAGA ACTTCGGGGT GATCATCCGT ACCGTAGCAA TGGGCAAGGA TGTGGAAGAG
CTTAACAAGG ACTTGCAGGA TTGCCTCGAC AAGTGGGAGA ATGGTATCAA AGCACTGAAA
GACGCCAAGC CACGCGACCG CGTGATCGGT GAAATGAACC GTGCATCCTC GATTATCCGC
GACATGCTCA ACGAGTCCTT CGATAGCATT ACCGTGGATT CGAAGGAGGT TTATGACGAT
ATCAAAGCTT ACATTCACAA CATTGCGCCG GAAAAAGAGA ACATTCTGCG CCTGCACAAT
GGGAAGAACA AGCTGTTCGA ACAATTCGGC CTGGAAAAGC AGATCAAATC TTTGTTCGGC
CGTTCGGTAA GCCTTCCAAA TGGCGGTTAC CTGATCATCG AGCACACCGA AGCATTGCAC
GTGATCGATG TCAACAGCGG TAACAAATCC AATTCCGAAG AGGATCAGGA AGCTACTGCA
TTGAGTGTCA ACCTCGAAGC GGCCAAGGAA ATTGCCCGCC AGCTGCGTCT GCGCGATATG
GGCGGCATCA TCGTTGTCGA CTTTATCGAC ATGAAAAAGG CGGAGAACAA GCGCACGCTG
TTCGACGTTA TGCGTGATGA AATGAAGGGC GACCGGTCGA AATACACCGT TTTGCCACTT
TCAAAATTCG GTCTACTGCA AATCACGCGT CAGCGCGTAA GGCCGGAAAT GAACATCGTA
ACCCGCGAAA CCTGCCCTAC CTGCGGCGGT ACGGGCACGA TCCAGGCGAG CATCCTCGTA
TCCGACGTGA TCGCCAACAA CCTCGATTAC ATTCTCACCA AGCAGAACGA GCGCGGCATT
ACCATTTCGC TCCATCCGTT CCTGCATTCG TATTTTACCA AAGGCCTCAT TTCAGAGCAG
GTGAAATGGT TCTTCCATTA CAAAACCTGG GTGAAACTGA TCAAAGACTC GTCGCTGGGC
GTGGTGGATT TCAAATTCCA TAACCGCTAT GGGGAGGAAA TTGAGATCGT GCCGGTGAAC
TGA
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| Protein sequence | MSNELLINST QKGERIALLQ DKRLLEYHVE TPDQSFTVGD IYLGTVRKLV AGLNAAFVDV
GFEKDAFLHY LDLGPNINSL NKLTKDVIAK RAHSGNLKNF KMEPEIEKLG KIDKVLSKNQ
PILVQIVKEP ISTKGPRLSC DISIAGRYIV LVPFSNSVNL SKKITDKQER NRLQRLMSSI
KPQNFGVIIR TVAMGKDVEE LNKDLQDCLD KWENGIKALK DAKPRDRVIG EMNRASSIIR
DMLNESFDSI TVDSKEVYDD IKAYIHNIAP EKENILRLHN GKNKLFEQFG LEKQIKSLFG
RSVSLPNGGY LIIEHTEALH VIDVNSGNKS NSEEDQEATA LSVNLEAAKE IARQLRLRDM
GGIIVVDFID MKKAENKRTL FDVMRDEMKG DRSKYTVLPL SKFGLLQITR QRVRPEMNIV
TRETCPTCGG TGTIQASILV SDVIANNLDY ILTKQNERGI TISLHPFLHS YFTKGLISEQ
VKWFFHYKTW VKLIKDSSLG VVDFKFHNRY GEEIEIVPVN
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