| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4349 |
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| Symbol | rpsC |
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| ID | 8227952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5272881 |
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| End bp | 5273708 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644932196 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_003088716 |
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| Protein GI | 255038095 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000122787 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.048354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAA AGGTTAATCC GATAGGTCTA AGACTAGGAA TTGTTAGAGG ATGGGAATCT
AGCTGGTACG GAGGAAAAGA CTTCTCTGAC AAACTGGTTG AAGACGAGAA AATCCGTAAC
TACATCAAAG CACGTATCCC GAAAGGATCG ATTTCAAAAG TAGTTATTGA ACGTACATTG
AAGCGCATCA CATTGACGAT CCACACTGCC CGTCCGGGTA TTGTGATCGG AAAAGGTGGT
AGCGAAGTTG ATAAAATCAA AGAAGAGCTT AAAAAGATTA CAGGCAAGGA TGTTCAGATC
AACATCTACG AAATCAAACG TCCTGAAATC GATGCGAAAC TGGTAGGCGA AGCGATCGCT
CAGCAATTGC AGGCTCGTAT TTCTTACCGT CGTGCGATGA AGCAATCGAT CGCTTCTGCA
ATGCGTGTAG GAACACAAGG AATCAAAATT CGTTTGGCAG GTCGTCTGGG TGGTGCTGAA
ATGGCCCGTA CAGAAGAATA CAAAGAAGGA CGTATTCCTT TGCATACATT GAGAGCGGAC
ATCGATTACG CTATCTCCGA AGCACAAACT ATCTACGGTA AGATCGGTAT TAAAGTATGG
ATCTTCAAAG GTGAATTGTA CGGAAAGCGT GACCTGACTC CAAGCGCAGC TACTGCGGCA
TCCGACAGGG CTGAAAGAAG CGCACAAGGC GGCGAACGTG GTGGTAACGA TCGCGGCGGA
CGTGGCGACA GAAGAGGCGG CCGTGACAGA AACGACGGAG CTCCTCGCGG AGAAGGTGGT
GGCGGTGATG CAGATCGTCG CAAACGCAAC AAGAACAAGA AGAAGTAA
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| Protein sequence | MGQKVNPIGL RLGIVRGWES SWYGGKDFSD KLVEDEKIRN YIKARIPKGS ISKVVIERTL
KRITLTIHTA RPGIVIGKGG SEVDKIKEEL KKITGKDVQI NIYEIKRPEI DAKLVGEAIA
QQLQARISYR RAMKQSIASA MRVGTQGIKI RLAGRLGGAE MARTEEYKEG RIPLHTLRAD
IDYAISEAQT IYGKIGIKVW IFKGELYGKR DLTPSAATAA SDRAERSAQG GERGGNDRGG
RGDRRGGRDR NDGAPRGEGG GGDADRRKRN KNKKK
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