| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3759 |
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| Symbol | |
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| ID | 8227345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4573845 |
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| End bp | 4574612 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931591 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003088128 |
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| Protein GI | 255037507 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.437728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTG GGGCGCATCA TCCGGATTAT TTTTATAGCA ACAAGATGAA GATCAATTTC
AAAGACATTA TCATATTCGA AGACGAGGAT TTTTTGGTGG TAAATAAACC GCCGCATCTG
GCAACCCTCG ATGAGCGTAC GGCTGACCGG GGCGGAAGCG TCCTCCGGCT TGCCAAAGAA
TACAATCCCG AATTACAAGC CGCCCACCGC CTCGACAAAG AAACATCGGG TGCATTGGCA
TTCGCGAAAA ATCCCGCAGC TTACCGGCAT CTGGCGATGC AATTCGAGCA TCGGGAAGTT
ACCAAACGGT ATCATGCCGT GGTGAACGGC ATCCATGACC TCGAAGGGAT TTCGGTGTAC
CTGCCCATTT TACCGCTGAA AAACGGAACG GCGGTGAAGA TCGACAGGGC GGATGGCAAA
GAGGCGGAGA CGATTTTCAA TACTTTGCAG GTGTACCGCG GCTACACATT AGTGGAATGT
ATCCCCATTA CCGGGCGCAT GCACCAGATC CGCATTCATT TGTCGTGCCT CAAAGCACCC
ATCGTGAATG ACCCGCAGTA CGGCGGCGAG CCGATCTTCC TTTCCAATCT GAAACGCAAG
TTTAATTTGA AAAAGGATAC GGAAGAGCAG CCTCTAATTC AGCGGGTTGC GCTGCATGCG
CGGTCGCTAT CGTTTGCCTT AATGAACGGC GAGGATATAC GCGTAGAGGC GCCTTACCCT
AAGGATTTCG AAGTGCTTGT AAAACAGCTC AATAAATTCG GCGTGTGA
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| Protein sequence | MAAGAHHPDY FYSNKMKINF KDIIIFEDED FLVVNKPPHL ATLDERTADR GGSVLRLAKE
YNPELQAAHR LDKETSGALA FAKNPAAYRH LAMQFEHREV TKRYHAVVNG IHDLEGISVY
LPILPLKNGT AVKIDRADGK EAETIFNTLQ VYRGYTLVEC IPITGRMHQI RIHLSCLKAP
IVNDPQYGGE PIFLSNLKRK FNLKKDTEEQ PLIQRVALHA RSLSFALMNG EDIRVEAPYP
KDFEVLVKQL NKFGV
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