| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2425 |
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| Symbol | |
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| ID | 8225997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2985886 |
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| End bp | 2987415 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644930257 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003086808 |
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| Protein GI | 255036187 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.144227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCG ACAAGCCAGC TAATGTCCCG AAAATCTGTT ATGAGATATT TGTCCGCTCT
TTCTGCGATT CGAACGGCGA CGGCATTGGC GATCTGAACG GCATCATTTC CAAACTCGAT
TACCTGGCCG ATCTGGGCAT CGAGGCGATA TGGCTCACGC CGATCCACCC TTCGCCGACC
TATCACAAAT ACGACGTCGT CGATTACTAC GCCATCGAGC CCGAATACGG CACGATGGAC
GATTTCAAGC GCCTCCTTGC CGGTGCCCAC GCGCGCGGGA TTGCCATTTA CCTCGACCTG
ATTATCAACC ACACCAGCAC GCTGCATCCG TGGTTCAGGG AAGCGCGGAA AAGCAAGGAT
AGCCCCTACC GGCAGTTTTA CTGGTGGATG ACCCAGGACC AGATCGATCA CCTGGGCATT
TCCGAGCGCG AAACTTCCGA CGACTCGCAA GTGGTGTATC CGTGGCACGA CAACCCGGAC
GACGACGAAA AGTACTACGG CCTTTTCTAC AAAGGAATGC CCGACCTCAA TTATCATTCG
GAACCTTTAC GGGAAGAAAT AGCCAAAATC GTGCACTTCT GGCTGGCCGA CATCGGCGTG
GACGGCTTCC GCCTCGACGC CGCACGGCAC ATTTATCCCG AATGGGACAG CGAGCAAAGC
ATCACTTTCT GGGATTTTTT TTCAAAAGTC GTCGCCAGGT CCAACCCAAA TGCATTCACT
GTGGGCGAAG TTTGGGCTGA TACAGAAGAA GTTGCCCCCT ATTTCCGAAA TCTGAACGCC
ACATTTCATT TCGACCTCAG CTTCGCGTTG CAGCGCATGC TCACCGCCGG CCGCGACGAA
CAGCTGGTGG ATAAACTGCT GGCCAGCTTC CAGCTTTTCC AGAAATACAA TCCGCTGTTT
GTGAATGCAA TCATGCTCAC CAACCACGAT CAGGAGCGGA TCGGGAGCGT TGTGGGCGGG
GATATGGATA AAATCAAACT GGCGGCTTCC ATTCTGCTCA CACTTCCCGG CCAGCCTTAT
CTCTATTATG GTGAAGAAAT CGGCATGCTA GGGTCGAAGC CTGATCCCTA CATTCGCGAA
CCGTTTCTCT GGACGGCCGA GCCGGACGAC CCGCAGCGTG CTTCCTGGAT CACCCCGGAA
TTTACCACGC TGAAAACAGT GGCGCCCCTT TCGGAGCAGA TCGGCGACGA AGCGTCTGTT
TATCAACATT ACCGAACCCT CATACATCTC CGCAGGACCG AACCTGCATT GAGCCAGATC
CTCGCCCCGA ACCTGCAACC CGTTCGCCTT AGCGACGACC GGCTGCTCGC CTACTTCCGC
CCGCACGTGG ACCGGTCGCT GGTGGTGATC CATAATCTTT CCGACGAGGC AACGGAATTC
ACCATGCCGG AGGATAAATC ACTTTACAGC GAAGTACTTT TCTCGACCGA CCCGCTGCAT
GCCACCACGC TCGCCGCGAG CCGTTTATCG CCCCACGCTA CGGTCATCCT CGCGCCCGCC
CGCACTCGTG CCATGCGCAA AAACCAGTAG
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| Protein sequence | MPADKPANVP KICYEIFVRS FCDSNGDGIG DLNGIISKLD YLADLGIEAI WLTPIHPSPT
YHKYDVVDYY AIEPEYGTMD DFKRLLAGAH ARGIAIYLDL IINHTSTLHP WFREARKSKD
SPYRQFYWWM TQDQIDHLGI SERETSDDSQ VVYPWHDNPD DDEKYYGLFY KGMPDLNYHS
EPLREEIAKI VHFWLADIGV DGFRLDAARH IYPEWDSEQS ITFWDFFSKV VARSNPNAFT
VGEVWADTEE VAPYFRNLNA TFHFDLSFAL QRMLTAGRDE QLVDKLLASF QLFQKYNPLF
VNAIMLTNHD QERIGSVVGG DMDKIKLAAS ILLTLPGQPY LYYGEEIGML GSKPDPYIRE
PFLWTAEPDD PQRASWITPE FTTLKTVAPL SEQIGDEASV YQHYRTLIHL RRTEPALSQI
LAPNLQPVRL SDDRLLAYFR PHVDRSLVVI HNLSDEATEF TMPEDKSLYS EVLFSTDPLH
ATTLAASRLS PHATVILAPA RTRAMRKNQ
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