| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2102 |
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| Symbol | |
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| ID | 8225674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2565081 |
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| End bp | 2566454 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929939 |
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| Product | sugar transporter |
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| Protein accession | YP_003086490 |
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| Protein GI | 255035869 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.612346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAG CAGGCGTTCC GCTTCCGGCA TTGGAGTACC CTCCCGTCCC GATCAACAAA
AAGTACGTTT ACCTGCTCTG CGCCATTGCC GCGCTGGGCG GGATACTGTT TGGTTTCGAC
CTGGTGATCA TTTCCGGGAC AGTTGCATTT TTTCAGGCGC ATTTCGGGTT GAGCGAACTC
GAAACGGGTC TGGCCGTTGG GTGTATCAAC CTCGGTGCTG CGGTGGGCGC AGTCATGGGT
GGCTGGCTTT GCGATCGGCT GGGCCGTAAA AAGCTACTGA TGATCTGTGC GGTACTATTC
GCGATGACGG GTGGCGGCAC CGGTTGGGCC ATGAGTTTTA ATATGTTTAT CGCGTTTCGC
ATGCTCAGCG GCGTTGCCGT GGGAGCGGCC GCATTGGTTT GTCCGATCTA CCTCGCCGAA
ATTTCGCCCG CATCTATGCG CGGCACCACC GTTTCGTTTT ACCAGCTATC GATTGTCGTC
GGTATCTTGC TGGCCTATCT TTCCAACTAC CTGTTGCTGA ATGTCGAAGA CAACTGGCGT
TGGATGTTTT CGTCCCAGTC GATCCCTGCA TTGCTGTTCT ATTTCAGCCT GTTCACCGCC
TCTGAAAGCC CGCGCTGGCT CGTGCGGTCG GGGCGTGAAT TCGAAGCGCA GATCGTACTG
GAACGCATTG GCGGCCTGGA CTACTCGCTG GCGGAGCAGG AGCAGATCGA GCAAAGCTTC
GCCGATAAGT CCGACACGGG CGTGTCGGAG CTATTTAAAA AGGAAGTCCG GCATATTGTG
TTTATCGGGG TCATGATCGC CGTGTTTTCG CAGATAGTCG GCCAGAATTC CATCTTCTCC
TATGCGCCGG AGCTTTTCAA AAAGGCGGGA ATGGCGCAGG ACTCGGCATT TATGCAGTCG
ATCATCATCG GGATCACCAA TTTTGTCTCC ACTTTCGTTG CCATTTTCAC GATCGACAAG
GTAGGGCGGA AGAAGCTGCT TCAATATGGG TCTTTCCTGC TGTTTGCCGA CGCCATTGCA
TTGGCGGCTG CGTTTTACAT GCAGTTATCG GGCATTTGGG TGTTGGTCTT CGTGCTGGCA
TTCATCGGCT TTTATTCGGC TACGCTCGGG CCGGTCACCT GGGTGACGCT GTCGGAGATT
TTCCCGAACC GTATCCGCGG AAATGCGATG GCCGTTGCGA CGCTGGCACT CTGGATCGCC
AATTTTTTCA CGACGTCCCT GTTCCCTGTC ATGAACCAGT ATTTCGGCGT GCCGGTCACC
TTTTTGATCC ACGCAGGCGT TTGTCTGGGT TACTTCCTCT TCATCCGGAA CAAAGTGCCC
GAAACAAGGG GCCGGTCATT GGAAGAAATT GAGAAACTAT TGGAAAAAAG CTGA
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| Protein sequence | MAQAGVPLPA LEYPPVPINK KYVYLLCAIA ALGGILFGFD LVIISGTVAF FQAHFGLSEL
ETGLAVGCIN LGAAVGAVMG GWLCDRLGRK KLLMICAVLF AMTGGGTGWA MSFNMFIAFR
MLSGVAVGAA ALVCPIYLAE ISPASMRGTT VSFYQLSIVV GILLAYLSNY LLLNVEDNWR
WMFSSQSIPA LLFYFSLFTA SESPRWLVRS GREFEAQIVL ERIGGLDYSL AEQEQIEQSF
ADKSDTGVSE LFKKEVRHIV FIGVMIAVFS QIVGQNSIFS YAPELFKKAG MAQDSAFMQS
IIIGITNFVS TFVAIFTIDK VGRKKLLQYG SFLLFADAIA LAAAFYMQLS GIWVLVFVLA
FIGFYSATLG PVTWVTLSEI FPNRIRGNAM AVATLALWIA NFFTTSLFPV MNQYFGVPVT
FLIHAGVCLG YFLFIRNKVP ETRGRSLEEI EKLLEKS
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