| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1096 |
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| Symbol | |
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| ID | 8224667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1296792 |
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| End bp | 1299683 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928958 |
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| Product | DNA polymerase I |
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| Protein accession | YP_003085510 |
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| Protein GI | 255034889 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0889452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.949667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAC CCATTCATAA GCTGTTCCTG CTGGACGCTA TGGCCTTGAT TTACAGGGCA
CATTTCGCGT TCATCAAGGC GCCGCGCATC ACTTCAAAGG GACTGAATAC CAGCGCCGTT
TTCGGCTTTA CCAACACACT GCTGGAAGTA CTGCAAAAAG AGAAACCTAC CCATATCGGC
GTTGCATTCG ATACCGCCGC GCCGACATTC CGCCATGTGC AGTTTGAAGC CTACAAGGCG
CAGCGCGAGG CGCAGCCGGA GGATATTACC GTAGCGATCC CACTCGTGAA GCGGCTTTTG
CGCGGTATGT GCATTCCCAT TCTCGAACTC GACGGCTACG AGGCAGATGA CATCATCGGC
ACCATTGCCA AGGAGGCTTC GCGGGAAGGT TTCGAGGTTT ACATGATGAC GCCCGACAAG
GATTACGGGC AATTGGTCGA ACAATACATT CACATTTACA AACCCGCATT CCTCGGCAAA
GGCGCCGAAG TGCTGGGCGT GCAGCAAATA CTCGACCGCT GGCAGATCCA GCGCATCGAC
CAGGTGATCG ACATTCTCGG ATTGATGGGC GACGCGGTCG ACAACATTCC GGGCATTCCG
GGCGTTGGCG AAAAAACGGC ACAGAAACTC ATCCAGGAAT ACGACACGAT CGAAAACCTG
ATCACACATG CCGGCGAAAT CAAAGGGAAA CTCGGTGAAA AAATCCGTGA AAACTTCGAT
AAAGCGGTGC TTAGCAAGCA GCTTGCAACG ATCGATTGCA AAGTGCCGGT GCCATTTGAT
GCCGAAGATC TCACCATTTG CTCACCCAAT GCGGAACTGA TCGCAGAGCT TTTCGATGAA
CTCGAATTCA AAACACTCAA AACCCGCATC CTGGGCGGCC AGCCAGGCGG TTCCGCAGGA
GCACTAAGTC CGCGCCCAGC AAGCGCGCAG GCTCCCGCAC GCAAAAACGC CAAAGGCCAA
CTCGACATTT TCGGTAATCC AACGGAAGAA ATCGGCCAGC AACCGGCGGC TGTGAGCGGC
GACCTTGCAG ATGGTGAACT CACCGAAGAC ACGTCCGAAA TCCGCATTCC GACATCCAAA
AGGACGATCG ACAATACTTT CCACCGCTAC CACACGGTGG ACACCCCGGA ACTGATGACG
AGCCTGGCGC ATTACCTGAG CTTGCAGGAC GCATTCTGCT TCGACACCGA AACCACCTCG
CTCGATACGA CGGACGCCGA GCTTGTAGGG CTGTCGTTTT CGTACCTGGC CGGCGAGGCT
TTCTACATTC CCGTGCCCGC CGACCGTCAG CAAGCCGAGG AGATTGTAGG GTATTTCAGG
GCGGTTTTTG AGAATGAAAA CATTGAAAAA ATCGGGCAGA ACATCAAGTA CGACATGCTC
GTGCTGAAAA ACTACGGCAT CGAAGTGCAC GGCAAGCTGA GCGATACCAT GCTCGCCCAT
TACCTGCTCG AACCGGATAA GCGCCACGGC ATGGACATTC TTGCCGCTTC CTACCTGAAC
TACGAACCGG TGTCGATCAC GTCGCTGATC GGCAAAAAAG GCGGGAAACA GGGCAATATG
CGCGACGTCG CTATTCCCGA AATCACGCAG TATGCCGGAG AGGATGCCGA TATTACGTTC
CAGCTGCATT CGATTTTCAG TCGGGAATTA CCCAAAGTGA ATGCGGCGAA GCTGTTCAAC
GAAGTGGAAA TGCCGCTCAC GAAAGTGCTG GCTTCTATGG AAAATACCGG CGTGCGGCTG
GACATCAATG CATTGAAGGA AATGTCGGCC GTGCTCGAAT CCGACCTTCG GCAAACCGAG
TCGGAGATTT ACGAAGCGGC CGGTCAATCG TTCAACATCA GCTCGCCCAA GCAGCTCGGA
GAAGTTCTCT TCGAGAAAAT GAAGCTGATT GAAAAGCCTA AAAAAACCAA AACAGGGCAA
TACGCGACAG GCGAAGAAAT CCTCTCCGAT CTGGAAGCCA ACCACCTGAT CGCACGCAAA
ATACTCGACT ACCGCGAGTT ACAGAAACTC AAATCCACTT ACGTAGATGC ATTACCGACG
ATGGTAAGCA GCCGCACCGG CCGCATTCAC ACGTCTTACA ACCAGGCCGT TGCAGCCACG
GGGCGGCTCA GTTCCACCAA CCCAAACCTG CAAAACATCC CGATACGCAC GCCGCGCGGC
CGAGAGATCC GCAAGGCATT TGTGCCTGAT TCCGCAGATT TCCAGATCCT TTCCGCGGAT
TACTCGCAGA TCGAATTGCG CATTATGGCG GCATTCAGCG GCGACGCGAG TATGACGGAA
GCGTTCAACC AGGGCCGCGA CATCCACGCT ACCACGGCCA GCAAGGTGTT CCAGGTGCCA
TTGGAAGAAG TGACTTCGGA CATGCGCCGG AAATCTAAAA TGGTCAATTT CGGTATCATT
TACGGCATTT CGGCATTCGG CCTTGCACAG CGCCTGGGCA TCCCGCGCGG GGAAGCGAGC
GAGATCATCC GCGCCTATTT CGAAGAATTC CCGGCCGTGA AAGGTTACAT GGACAAAGTC
GTGAACGACG CCCGCGAGCG CGAATATGTA GAAACGATCC TGGGCCGCCG CCGCTATCTG
CCGGATATCA ACTCCCGCAA CCAGACCAAC CGCGGCTACG CCGAACGAAA CGCCATCAAC
GCCCCGATCC AGGGCTCGGC CGCCGACATG ATCAAAGTCG CGATGATCAA CATCCACGAC
TTCATGGCAA AAGAAAAGCT CAAATCGCGG ATGATCCTGC AAGTGCATGA CGAACTCGTC
TTCGACGCGC ATTACAGCGA AATCGACCTC CTGAAAGAAC GGGTGGACGA ACTGATGCGA
AACGCAATCC CGATGGCCGT TCGCATGGAA ACCGGCATCG GCGTCGGTGC GAACTGGTTA
GAGGCGCATT GA
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| Protein sequence | MEKPIHKLFL LDAMALIYRA HFAFIKAPRI TSKGLNTSAV FGFTNTLLEV LQKEKPTHIG
VAFDTAAPTF RHVQFEAYKA QREAQPEDIT VAIPLVKRLL RGMCIPILEL DGYEADDIIG
TIAKEASREG FEVYMMTPDK DYGQLVEQYI HIYKPAFLGK GAEVLGVQQI LDRWQIQRID
QVIDILGLMG DAVDNIPGIP GVGEKTAQKL IQEYDTIENL ITHAGEIKGK LGEKIRENFD
KAVLSKQLAT IDCKVPVPFD AEDLTICSPN AELIAELFDE LEFKTLKTRI LGGQPGGSAG
ALSPRPASAQ APARKNAKGQ LDIFGNPTEE IGQQPAAVSG DLADGELTED TSEIRIPTSK
RTIDNTFHRY HTVDTPELMT SLAHYLSLQD AFCFDTETTS LDTTDAELVG LSFSYLAGEA
FYIPVPADRQ QAEEIVGYFR AVFENENIEK IGQNIKYDML VLKNYGIEVH GKLSDTMLAH
YLLEPDKRHG MDILAASYLN YEPVSITSLI GKKGGKQGNM RDVAIPEITQ YAGEDADITF
QLHSIFSREL PKVNAAKLFN EVEMPLTKVL ASMENTGVRL DINALKEMSA VLESDLRQTE
SEIYEAAGQS FNISSPKQLG EVLFEKMKLI EKPKKTKTGQ YATGEEILSD LEANHLIARK
ILDYRELQKL KSTYVDALPT MVSSRTGRIH TSYNQAVAAT GRLSSTNPNL QNIPIRTPRG
REIRKAFVPD SADFQILSAD YSQIELRIMA AFSGDASMTE AFNQGRDIHA TTASKVFQVP
LEEVTSDMRR KSKMVNFGII YGISAFGLAQ RLGIPRGEAS EIIRAYFEEF PAVKGYMDKV
VNDAREREYV ETILGRRRYL PDINSRNQTN RGYAERNAIN APIQGSAADM IKVAMINIHD
FMAKEKLKSR MILQVHDELV FDAHYSEIDL LKERVDELMR NAIPMAVRME TGIGVGANWL
EAH
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