| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0650 |
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| Symbol | |
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| ID | 8224219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 755124 |
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| End bp | 756611 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644928523 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003085077 |
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| Protein GI | 255034456 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0713148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.104092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAT TGTGTATTGT ACTGTTCCTG TTGACATTAT ACCAAACTGT AAATGCCCAG
CGTGCGGTCG TCCGCGGCGA TTTCGCCGAC CCGTCGGTGA TCAAGGTGGG CGATACTTAC
TATTCCGCCG CAACCAGCTC CAACTGGGCG CCTGCATTCC CGCTGATGAA ATCGAAGGAC
CTTCGGAACT GGGAACAGAT CGGCGCCATT TTTCCCGACC TCACCACCTG GGCCGATTAC
TACTACTGGG CACCCGAACT GAATTACGAT AATGGAAAGG TGTACGTGTA TTACACTGCG
CACAAAAAAG GCGGCAACCT GTGCGTCGGC GTTGCCAGTG CCGATCGGCC GGAAGGCCCT
TACAAAGACC ACGGCCCGCT GGTATGCGAG GCAGCAGGCT CTATCGACGG CTTCCCCATG
CGCGACGAGC AGGGCAAGTT GCACCTGATC TGGAAGGAGG ACGGCAACAG CATCGGAAAG
CCGACGCCGA TCTGGATACA GCCGATGAAT GAAGAACGGA CCGCGCTGAC CGGCGAAAAA
AAGGAGCTTT TCCGCAACGA CGCGCCCTGG GAAGCTAATC TCGTGGAAGG TGTGGCTGTG
GTGAAAAACA ATGGCTATTT CTTCGCGATT TACGCGGCTG CGGGCTGCTG CGGACCTGGC
TGCACCTATG CAACGGGCGT TGCACGCGCG AAAAACCTGC TGGGGCCGTG GGAGAAGTTT
GCCAGCAACC CGATCCTCAC CGCCGAGGGC GATTGGATGT GCCCCGGCCA CGGAACCGCG
GTAACGCACA ATGGCAAAAA TTACCTGATG TACCACGCCT ACGACAAGGC ATCCAACAAA
TACACAGGCC GGCAGGCGCT CATCCGGGGC TTCGAGTTCA CGCCCGACAA CTGGCTCCGC
TTCACCAACG AATACATTAC CCCCGCCGAC ACCCGCACCG CCTACACCGT CAGCGATCGT
TTCGATAAGC CGGAACTGGA CGTGCAATGG AGCTGGTCGG TGTTCAATAA ACCATCCGTG
CAGATCGGCA ACGGCCAGTT AGGCATTAAG CTGAAAAACG AGCGGGAAGT ATTTATCGCC
CGGAAAATCG ACAGCCCTGC GCACGAAACC ACGGTGGAAA TTATCCCAGC GCGAGCCGCC
CTGGCCGGCG TAGGGCTCAT CGGCGACGAC CAAAACCTGA TTTATGCTGC CGCCACGCAG
GATAGCATCC AGGTTGCAAT GCTCAAAAAG GGCGTCAGCA GCAGCCTGGG CAAGTTTCCC
CTGGCGGCCA AAGGGAAGCG TGTGTTTTTG AAAATGCTGG TTAAAAACAA TACTGCCATC
AGTTTCCAGT ACAGCCTGAA CGGAAAGACA TTTATTTCCC TGAACATCCC GGCTACGGAT
ATCAGCTATC TCCCGCCATG GGACCGCGCC GTGCGTGCGG GCATCATTGC CAAAGGGCGG
GCGGGAGATG AAGCAACAGT GGAAGGATTT GTATTTCAAA GCAAATAA
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| Protein sequence | MKRLCIVLFL LTLYQTVNAQ RAVVRGDFAD PSVIKVGDTY YSAATSSNWA PAFPLMKSKD
LRNWEQIGAI FPDLTTWADY YYWAPELNYD NGKVYVYYTA HKKGGNLCVG VASADRPEGP
YKDHGPLVCE AAGSIDGFPM RDEQGKLHLI WKEDGNSIGK PTPIWIQPMN EERTALTGEK
KELFRNDAPW EANLVEGVAV VKNNGYFFAI YAAAGCCGPG CTYATGVARA KNLLGPWEKF
ASNPILTAEG DWMCPGHGTA VTHNGKNYLM YHAYDKASNK YTGRQALIRG FEFTPDNWLR
FTNEYITPAD TRTAYTVSDR FDKPELDVQW SWSVFNKPSV QIGNGQLGIK LKNEREVFIA
RKIDSPAHET TVEIIPARAA LAGVGLIGDD QNLIYAAATQ DSIQVAMLKK GVSSSLGKFP
LAAKGKRVFL KMLVKNNTAI SFQYSLNGKT FISLNIPATD ISYLPPWDRA VRAGIIAKGR
AGDEATVEGF VFQSK
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