| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0102 |
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| Symbol | |
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| ID | 8223668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 118113 |
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| End bp | 120500 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644927981 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003084538 |
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| Protein GI | 255033917 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAT CTACATTCTG CTGCTCGCGG ACTAGCGGCA GGGAGGCGAA AAATTCATTT
TTACTACTCA TTTCATTCGC CCTGTTATGG TGTTCATTTC CCAGTTTCGG CGCTGCGCCG
GGGCGGGTGA CAGGCTCCAT TCAAAGCGAA AAAGGCGATG CTATTGCCGG GATCAGCGTG
CGGCTGGAAG GCACCAGCTA TGCGGCCGTA ACCGACGCGG ACGGCCGGTT TGACATTAAA
AACGTCCAGG CAGGAAGCTA CACGCTCGTT GCCACCGGCG TGGGCCATGA GGCAAAAAAG
CAAAATATCG TTCTCAAAGA TGGCCAGGCG CTGGAATTGA ATTACAAACT CAATACCAGC
ACCAACGAGC TTTCCGAGGT CGTGATCAGT ACCGCGCGGC GCCAGGCTTA TTCGGGCATT
AACAAAATCG ACGTCCCGCT GCGCGATATG CCCATCACCA CTTCCACCAT ATCGGCAAAA
ACGATCGAAC AGCGCGGTAT CGACGATTTG GGCGAGGCCA TGAAAAATAC GACAGGCGTG
CGGGCCAACA ACACCTACGG CGGCTTTCAG CATTTTACAA TCCGCGGTTT TTCCAACTTC
GTGCTTTTGG TGGATGGCGT GCGCGATGAG CGGCACAACA TTTCCACCAG CGCGCCGAAC
ACGAACCTGG CCAATGTGGA ATCCATAGAA ATACTGAAAG GGCCGGCTTC CGTGCTGTTT
GGACATTCGG CATTGGGCGG CATTATCAAT ATCGTCAGAA AAAGGCCCAC TGCGGGCTTT
AAGGCGGACT TTTCGGCTAG TTATGGCAGC TTTAATACAA GAAGAATCCG TGCCGGTGCG
GGCGGGGCAA TCAGCGATAA GCTGCGCTAC CGCGTGGATT TCGGCATGTC GGACACCGAC
GGCTTCCGGC ATTCGGGGTC AAATACCAAC AATGGCTACC TGGCATTGGA ATACACGCCG
ACGGACAAAG ATCAGTTCTA CCTGACCATC GGGGCCAACA AAGACATTTA CGATACCGAC
GCAGGTATTC CTGTGCTCGA AGGCAGCAAA GCAGCTCCGG GCATGAATGT AAATACCCGC
TACAACGACC CGCAGGATTT TCTCAAACAC ACCCGCTATG ATTTCCAGTT GAAGTACACG
CGTCAGTTGG CGAGTAACCT CAAACTGTCG AACCAGCTTT CTTACTACGA CGATAATATC
GACTATTTCT CGACCGAGGA GCTGACCTTT ACCCCGGGGA TGGATTCGTT GCAGCGCTCG
TTTCCGTTCT ATTTCAACCA CCTTACCAAG CCGTGGCAAA ACCAATTGGA ACTGACCTGG
GATTTTAGTA CCGGTCCGAT CGAGCACAAG CTGCTGGCAG GATATTCGGT GAGTATTCTG
GATAGAAAAA CGTATAACGG CGATGTTTTT GGCCCGGCCC TGAATGCGAC CATTCCTATC
AGTAACCCGA TCCTGAACCA AGGTTATCTG ACGCATAACG ATCTGAATTA CCGGGCAACA
ATGGAAAATG TCCACGGTAT TTACGTGCAG GATTTTATCC CTTTCTCAGA CAAACTGAAA
GGACTTGCGG GTCTTCGCTA TGATATTTTC AACGGCACCT ATTACACCGA TAAAGTAGAT
AACAACCGCA ATGTAACCGA GCACGGCGCA GAATCGACGA TCTCCAAATC CGCATTGACC
TACCGATTGG GGCTGGTGTA TCAGCCGGTG GAGCCGCTGT CGGTTTACGG TTCGTTCTCC
ACTTATTTCA AACCTGCACG ACGCGTGGCG CCGAACGGCG AGACTTTCGA TCCCGAAACA
GGTTACCAGG GTGAAATCGG AAGCCGATTC GAGCTTTCAC GGAAATGGGC GGCTAACCTG
GCATTCTATT ACATGCGCAA GAATAACCAG CTCGAAGCGC TTGCTGGTGG CATTTACAGG
CGGATCGGCT CGGCGGAGTC CAAGGGCGTT GAGCTGGAAG TGAATGGAAA CTTGCTGCCC
GGGCTCGACG TGAGAGCGGG ATACACATTT TCCAAAGCAG AAATCCTTCC TTACTCGCCC
GGTGAGGCTA CCAATGCCCT GGCAGGGAAA ACGGTGGCTT TTGCTCCCAA AAACTTGCTG
AATGCCTGGG TGAACTATGA AGTGCAGCAG GGTGCTGTAA AAGGACTGAG CCTGAGTGCC
GGTGCCAACT ATATGGATGA GACTTTCACA AACAGTTCCA ACAGCTACGT GCTGCCCGCC
TACACCGTTT TCGATGCGGC GCTGGGATAC CGGATTGGGA AAATTGGTTT AAGATTGAAT
GTCAATAACC TCTTCAACGA AAAATATTTC GCGAATGCCA TTTTCGCAAA CCAGTTCTCG
GCCGGCCCGA CCAGAAATTT CCTCGTAACG GTGCGGTATA GCCTTTAA
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| Protein sequence | MQTSTFCCSR TSGREAKNSF LLLISFALLW CSFPSFGAAP GRVTGSIQSE KGDAIAGISV
RLEGTSYAAV TDADGRFDIK NVQAGSYTLV ATGVGHEAKK QNIVLKDGQA LELNYKLNTS
TNELSEVVIS TARRQAYSGI NKIDVPLRDM PITTSTISAK TIEQRGIDDL GEAMKNTTGV
RANNTYGGFQ HFTIRGFSNF VLLVDGVRDE RHNISTSAPN TNLANVESIE ILKGPASVLF
GHSALGGIIN IVRKRPTAGF KADFSASYGS FNTRRIRAGA GGAISDKLRY RVDFGMSDTD
GFRHSGSNTN NGYLALEYTP TDKDQFYLTI GANKDIYDTD AGIPVLEGSK AAPGMNVNTR
YNDPQDFLKH TRYDFQLKYT RQLASNLKLS NQLSYYDDNI DYFSTEELTF TPGMDSLQRS
FPFYFNHLTK PWQNQLELTW DFSTGPIEHK LLAGYSVSIL DRKTYNGDVF GPALNATIPI
SNPILNQGYL THNDLNYRAT MENVHGIYVQ DFIPFSDKLK GLAGLRYDIF NGTYYTDKVD
NNRNVTEHGA ESTISKSALT YRLGLVYQPV EPLSVYGSFS TYFKPARRVA PNGETFDPET
GYQGEIGSRF ELSRKWAANL AFYYMRKNNQ LEALAGGIYR RIGSAESKGV ELEVNGNLLP
GLDVRAGYTF SKAEILPYSP GEATNALAGK TVAFAPKNLL NAWVNYEVQQ GAVKGLSLSA
GANYMDETFT NSSNSYVLPA YTVFDAALGY RIGKIGLRLN VNNLFNEKYF ANAIFANQFS
AGPTRNFLVT VRYSL
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