Gene Dfer_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0006 
Symbol 
ID8223571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5789 
End bp7327 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content53% 
IMG OID644927885 
Productmagnesium chelatase, subunit ChlI 
Protein accessionYP_003084443 
Protein GI255033822 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.388384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.114957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTACT CGAAGCTTAC AAGCACAGAA CTGTTGGGAA TCCGAACGCT CGGTGAACTA 
AAAAAAGCAG GTTATCAGTC GCGTTCTATC AAGCAGGAGC TGAGAGATAA CCTGATTGAA
AAGATCAGGA ACAAGGAGAA TGTCTTCCCG GGGATCTGGG GTTATGAGGA AACGGTCATT
CCGGATGTGG AAAGAGCCAT TCTTTCCATG CATAACATCA ACTTCCTCGG CTTGCGCGGG
CAGGCCAAGA CGCGTATCGC ACGCATGATG GTGAACCTGC TGGACGAATA CATTCCGTAC
ATTAAAAATT CGGAGCTGCA CGACGATCCT TTGGCGCCGC TTTCGCGCTA TGCCAAAGAT
GTGCTCGCCG AGCAGGGCGA CAATGCTGAA ATCGCCTGGC TGCACCGCGA CGATCGCTAT
ACCGAAAAGC TGGCCACGCC GGACGTTTCG GTGGCAGATT TGATCGGTGA CGTCGATCCC
ATTAAGGCAG CAACGCTGAA ATTGCCCTAT TCCGACGAAC GCGTGATCCA TTTCGGGCTC
ATTCCCCGCT CCCACCGCGG CATTTTCGTG ATCAACGAGC TGCCCGATTT GCAGGCGCGT
ATCCAGGTGG CATTGTTCAA TATCTTACAG GAAGGCGATA TTCAGATCCG TGGTTTCAAG
CTGCGGCTGC CGCTCGATAT TCAGTTTGTG TTTACTGCCA ACCCGGAGGA TTATACCAAC
CGCGGAAGCA TTGTAACACC GCTGAAAGAC CGGATCGAGA GCCAGATCGT GACGCACTAT
CCGAAAACAA TCGAGACAGG CAAGCGCATT ACTGAGCAGG AAGCGATTGT GAAGCCCGAG
CAAGTGGGCC TCGTACGCGT GAATGAGCTC GTGAAAACGC TCATCGAGCA GATCGCATTC
GAAGCGCGTG AAAGCGAATA TGTGGATGCA AAAAGCGGTG TTTCGGCGCG CTTGACGATC
TCAGCTTACG AAAGTCTTTT GAGCACCGCC GAACGCAGAG CGCTTATCAA TGCCGAAGAT
TCGACTTATG TGCGCATTTC AGACCTTTAC GGCGTCGTTT CTGCGATTTG CGGCAAGGTG
GAGCTGGTGT ATGAAGGTGA GGTGGAAGGC CCGGTAATCG TGGCACAGAA CCTGATCGGC
AAAGCGATCC GCACGCAGTT CCTCAACTTC TTCCCCGACC CCGAAAAAAG CAAGAAAAGC
AAGATCAATC CTTACGCGAA AGTGGTGGAA TGGTTTGGCG CCGGCAACGA AATGGAAATG
CCCGCCGACA TGACCGATCG CGAATACATC GCGCGCCTGA AAACCATAGA CGGCCTGGAC
GATTTCGTGG ACATGCTCTC CGCTTACGGC GACCCCGAAG AGAAATTGTT TATGATGGAA
TTCGCATTGC ACGGCATGGC GGAGTTTTCG CTTGTGGGCA AGCAGGCCCT CGACCAGGGT
ATGAAGTTTC AGGACCTGGT GAGCAGCATG TTCTCCGGCC CCGGCGATGA AGATTATGAT
TTCGATGAAG ACGACGATGA TGACCGTAAG CCTTTTTAA
 
Protein sequence
MTYSKLTSTE LLGIRTLGEL KKAGYQSRSI KQELRDNLIE KIRNKENVFP GIWGYEETVI 
PDVERAILSM HNINFLGLRG QAKTRIARMM VNLLDEYIPY IKNSELHDDP LAPLSRYAKD
VLAEQGDNAE IAWLHRDDRY TEKLATPDVS VADLIGDVDP IKAATLKLPY SDERVIHFGL
IPRSHRGIFV INELPDLQAR IQVALFNILQ EGDIQIRGFK LRLPLDIQFV FTANPEDYTN
RGSIVTPLKD RIESQIVTHY PKTIETGKRI TEQEAIVKPE QVGLVRVNEL VKTLIEQIAF
EARESEYVDA KSGVSARLTI SAYESLLSTA ERRALINAED STYVRISDLY GVVSAICGKV
ELVYEGEVEG PVIVAQNLIG KAIRTQFLNF FPDPEKSKKS KINPYAKVVE WFGAGNEMEM
PADMTDREYI ARLKTIDGLD DFVDMLSAYG DPEEKLFMME FALHGMAEFS LVGKQALDQG
MKFQDLVSSM FSGPGDEDYD FDEDDDDDRK PF