Gene GM21_2537 details

Gene Information

• Locus tag: GM21_2537
• ID: 8137879
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 2964590
• End bp: 2966647
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644870146
• Product: NAD-dependent epimerase/dehydratase
• Protein accession: YP_003022336
• Protein GI: 253701147
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1088] dTDP-D-glucose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 38
• Fosmid unclonability p-value: 0.00000121125
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAAAGGGG CGACCAGTGA AGCTGTACCG GGGCACTTTG GCATAGTGGA GTGGTTTAGG 
CCGGGCGAGC GGGAACGGGT GGAACGGGTC CTCTCCGACA TGAAGGCGAT CGGCGCCAAG 
AGCCTCAGGA CCGGGATCTC CTGGGCGGAC TGGTACACGA GCGAAGGGAA GAAGTGGTAC 
GACTGGCTCA TCCCGCGGCT GGCGCGGGAG GTGGAGCTCC TTCCCTGCGT GCTTTACACC 
CCCCCCTCCA TCGGGATCGA GGCGAAGACC TCCTCCCCCC CGCGTCGTCC CAAGGATTAC 
GCCGACTTCA TCGACCTCTT CATCACCGCC TTCGGGGAGC ATTTCGAGTA CCTGGAACTC 
TGGAACGAGC CGAACAACCT GAGCGAGTGG GACTGGACCC TCGACCCGCA CTGGACCTCC 
TTCGGCGAGA TGATCGGGGG GGCGGCCTAC TGGGCCAGAA AGCGCGGCAA GAAAACGGTC 
CTCGGGGGGA TGAGCCCCAT CGACGGCCAC TGGCTCTGCC GGATGTTCGA GCTGGGGGTG 
ATGGATTACA TCGACGTGGT GGGGATCCAC GGCTTCCCGG ACATCTTCGA TTACACCTGG 
AAGGGGTGGC AGCGCAACAT CGCCATGGTG CGGGAAATCC TGGACGAGAG GGAGTGCGCC 
TGCGAGATCT GGGTCACCGA GGCGGGGTTC TCCACCTGGC AGCACGACGA GTTCAAGCAG 
GCAAAGGTCT TCCTCGATTT CCTCGCCGCC CCGGCGCAGC GCGTCTACTG GTACGGCGTG 
GACGATCTCG ATCCGTCGCT TTCCGCGGTG GACCGCTACC ATCTGGACGA GCGCGAGTAC 
TTTTTCGGCT TGAAGAAGGC GGACGGAGCG CCCAAGCTCC TCTACCGCCT GCTCCGGGAG 
GGGACGCTTT CCTCCCTCAA GCGCGTGGTG GCCGCGGGGA GCGCCGCGAG GGTGGACGGC 
GGCGGGGCGG AAAAGGCGGT GCTTGTCACC GGGGGGGCCG GGTTCATAGG GACCAACCTG 
GTGCAGCACC TGGTGGCGCA GGGGGAGAGG GTGATCCTCT ACGACAACCT CTCCCGCGCA 
GGGGTCGAGA AGAACCTCCT CTGGCTCATG GACAACTGCG GCGAAAGGCT GCAGGTGGTG 
ATAGGTGACA CCCGCAACTC TCTCCTTCTG GAGCAGGCGG TAAGCGAGGC GAAGCAGGTC 
TTCCACTTCG CGGCCCAGGT AGCGGTCACC ACCAGTATCG ACAACCCCGG GAACGACTTC 
TCCGTCAACG CCCAAGGGAC CTTCTCGCTC CTGGAGGCGA TCCGCAAGGC GAAGACCCCT 
CCTTCGCTTC TCTACACCTC CACCAACAAG GTGTACGGGG CCATCGAGGG GTGCGGCGTC 
CGGAAAAACG GGGTGCGCTA CGAGCCGCTC GACCCGCAGC TCCGCTCCCA CGGACTGGGA 
GAGGAGACCC CGCTCGATTT CCTGAGCCCC TATGGCTGCT CCAAGGGGTG CGCCGACCAG 
TACGTCCTGG ACTATGCCCG CAGCTTCGGC ATCGCGGCGG CGGTCTTCCG GATGAGCTGC 
ATATACGGTC CGCACCAGTA CGGCACCGAG GACCAGGGGT GGGTGGCGCA CTTCGCCATA 
CAGACCATGA AGGGGGAGCC CATCACCCTC TACGGGGACG GCTGCCAGAT CCGGGATCTT 
CTCTTCGTGG AGGACCTGGT GGACGCCATG TGCCGGGCGC GGGACATCAT GCCCCGCATA 
GCCGGGCAGG CTTTCAACAT CGGAGGCGGC CCCGCCCGCA CCATAAGCCT CTTGGAGCTT 
TTGGATCTTT TGCGCGAGCT GCACGGCGGA CTTCCCACCA TACTGCGCGA CGACTGGCGC 
ACGGGGGACC AGAGATACTA CGTCTCGGAC ACCAGGAAGT TCTGCAAGGC GACCGGATGG 
ACGCCGCGGC ACTCGGTGGC CGAGGGGGTG CGCAGGCTGT ACGACTGGCT CCTGGAAACA 
ATGCACTCCC CGGCGCGCGG CGCCGGGAGC TTCGACAAGC AAAGGTACCC GGCGACGGGA 
GCGGAGGCGA TCGGATGA 

 

Protein sequence

MKGATSEAVP GHFGIVEWFR PGERERVERV LSDMKAIGAK SLRTGISWAD WYTSEGKKWY 
DWLIPRLARE VELLPCVLYT PPSIGIEAKT SSPPRRPKDY ADFIDLFITA FGEHFEYLEL 
WNEPNNLSEW DWTLDPHWTS FGEMIGGAAY WARKRGKKTV LGGMSPIDGH WLCRMFELGV 
MDYIDVVGIH GFPDIFDYTW KGWQRNIAMV REILDERECA CEIWVTEAGF STWQHDEFKQ 
AKVFLDFLAA PAQRVYWYGV DDLDPSLSAV DRYHLDEREY FFGLKKADGA PKLLYRLLRE 
GTLSSLKRVV AAGSAARVDG GGAEKAVLVT GGAGFIGTNL VQHLVAQGER VILYDNLSRA 
GVEKNLLWLM DNCGERLQVV IGDTRNSLLL EQAVSEAKQV FHFAAQVAVT TSIDNPGNDF 
SVNAQGTFSL LEAIRKAKTP PSLLYTSTNK VYGAIEGCGV RKNGVRYEPL DPQLRSHGLG 
EETPLDFLSP YGCSKGCADQ YVLDYARSFG IAAAVFRMSC IYGPHQYGTE DQGWVAHFAI 
QTMKGEPITL YGDGCQIRDL LFVEDLVDAM CRARDIMPRI AGQAFNIGGG PARTISLLEL 
LDLLRELHGG LPTILRDDWR TGDQRYYVSD TRKFCKATGW TPRHSVAEGV RRLYDWLLET 
MHSPARGAGS FDKQRYPATG AEAIG