| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1630 |
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| Symbol | |
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| ID | 8136961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1898631 |
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| End bp | 1899503 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644869243 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003021443 |
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| Protein GI | 253700254 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 173 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTA CAGGAAAAAC CAGGGTCACC GGGATCATCG GCTGGCCGGT CGCTCACTCC
CTTTCGCCGC CGATGCACAA CGCCGCCTTC GAGGCGCTCG GGCTCGACTT TGCCTACGTC
CCGTTCCCTG TGGCGCCGGA GCGCCTCGCC GCGGGGATAG CCGGCCTCGC CGCGCTGGGT
GTGGTCGGCT TCAGCGTCAC CATTCCGCAC AAGGTGGCGA TCTTGCCCCT TTTGGACCGC
ATCGCGCCGG AGGCCGAATT GATCGGCGCG GTGAACACCG TCGCGGTAAA GGAAGGGATC
TTGACCGGCT ACAACACGGA CGGTATCGGT CTTTTGTCCG CGCTCCGCTC GAAGCTCGGA
TTTCAACCCG AGGGACGCTC GGTGCTGGTG TTAGGCGCTG GCGGGGCCGC CAGAAGCGCC
GTCGCCTCGC TGGGGCTCGC CGGCGCCGGC CGGGTCGAGG TGGCGAACCG CTCCCTTGAC
GCGGGGCGCG GGCTGGCAGA GACGATGGGC GAGCGCCTCC CCGGTACAGT TTTCGGGTTT
CAGCCGCTGG GCCGGGTATC CGATAAGGGA TACTTGTCCG GCTTCGACCT CGTGGTCAAC
ACCACCTCCG TCGGGATGGC GGGGGACGGC TTCGCCGGGC TCGATCTTTC CGCGCTGAAG
CGCGGCGCCA GCGTCTACGA CATGGTGTAC GCGCCTTTGG TAACCCCCTT GCTGGCGCAG
GCGGAGGTTG TAGGTGTGCC GAGCGCGAAC GGGCTGGGGA TGCTGGCCGC TCAAGGGGAG
GCGGCATTCC GGATCTGGAC CGGAGCCGTC CCTCCGGAGG GGTGCATGGA AAAGGCTCTC
GCCGCCCGGC TCGCAACCCC AGGTAACCCT TGA
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| Protein sequence | MTITGKTRVT GIIGWPVAHS LSPPMHNAAF EALGLDFAYV PFPVAPERLA AGIAGLAALG
VVGFSVTIPH KVAILPLLDR IAPEAELIGA VNTVAVKEGI LTGYNTDGIG LLSALRSKLG
FQPEGRSVLV LGAGGAARSA VASLGLAGAG RVEVANRSLD AGRGLAETMG ERLPGTVFGF
QPLGRVSDKG YLSGFDLVVN TTSVGMAGDG FAGLDLSALK RGASVYDMVY APLVTPLLAQ
AEVVGVPSAN GLGMLAAQGE AAFRIWTGAV PPEGCMEKAL AARLATPGNP
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