| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4278 |
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| Symbol | |
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| ID | 8135281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4840462 |
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| End bp | 4842486 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867600 |
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| Product | putative oxidoreductase Fe-S binding subunit |
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| Protein accession | YP_003019828 |
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| Protein GI | 253690638 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGGT TTGTTATTGC CAGTACTCAA GACTGTATGG GGTGCCATGC ATGCGAAATC
GCCTGTGTCA TTTCACACAA CGATGAGCAG TATCCAGATA GCACCACGGT GTTTCAGCCC
AGAATCAAGG CATTCAATAC GCCAACGTTG CGGGCTGCCG TGACATGTCG CCATTGTGAA
GATGCCCCCT GCGCCAGCGT GTGCCCAACA CAGGCCTTGA TCAGAAAAGA CAATAGCATT
CAGCTCGTTC AGGAAAAGTG CATTGGCTGT AAAAGCTGTG TGCTGGCTTG CCCGTTCGGT
GCGATGTCCA TGGTGACAAA TCCCGTGGAC AATAGCACTG TCGCCCATAA GTGCGATCTC
TGCGCCGATC GTCCAGAAGG GCAAGCCTGT GTCGCCGCCT GCCCAACACA CGCCTTGCAG
TTGGTCAGCG AACAAACGTT AGCGGCCCGC CGTCAGGAAA AACAGCAGAC GATGGCGCTG
CGTTCAGCCT CCCACTGGCA GCGTGAAACA CCCGTGCTGA AAGCGCTAAC GACCAATCCG
CTCAGTAAAA GAAAAAACTG GCCGCGCCGG GATGCTGAGA AAAAGCCGCT GACCCTGAGA
ACCTCCACGT TTGATGAAAT CTATCACGGC TTCTCCGTTC AGCAGACGGA AGATCAGGCT
GACCGCTGCC TTTCCTGCGG CAAACGCGCG ATCTGCGAGT GGACCTGTCC GCTGCATAAC
AATATTCCCG AACTACTAAG TCTCGCGAAA CAGGGGCGGA TTCTTGAAGC CGTCGAACTC
TCACATCAAA CCAGCAGCCT GCCAGAAATC TGCGGCCGGG TATGCCCGCA GGATCGACTA
TGCGAAGGGG CCTGTACACT GGGTAAAGAG TACGGCGCCA TCACCATCGG CAACGTAGAG
CGCTACATTA CCGATACCGC AATGGCAATG GGCTGGTCGC CCGATATGAC GCGTGTCGTT
CCCAGCGGCA AACGTGCGGC GATCGTCGGT GCTGGCCCGG CAGGGTTAGC CTGCGCCGAT
GTGCTCGCGC GCAACGGCGT GCAGGCTGTC GTGTTCGACC GCCACCCGGA AATTGGTGGG
CTGCTCACAT TCGGGATCCC GTCGTTCAAA CTGGATAAAG AGGTGCTGAT TCATCGCCGT
GAAGTATTCA GCGCGATGGG AATCGAATTC CAGCTGAATA CCGAAGTGGG GAAAGATATT
TCTCTGGCTC AGCTTCTGGA TGACTATGAC ACCGTTTTCC TCGGCGTAGG CACCTACCGC
TCCATGAAGG CTAACATTGA TAATGAAGAG GCTCCCGGCG TCTTCGATGC GCTCCCTTTC
CTGATTGCCA ATACCAAGCA CGTCATGGGA CTGCCTGAAT TAGACGACGA GCCTTATATC
TCGATGGCGG GCAAGCGCGT CGTGGTGCTC GGCGGTGGAG ATACCGCGAT GGACTGCCTG
CGCACATCCG TTCGACAAGG CGCAGTATCC GTCACCTGCG CATACCGTCG CGATGAAGCG
AATATGCCCG GTTCGAAAAA AGAGGTAAAA AATTCCCGTG AAGAAGGCGT GGAGTTCATG
TTTAACGTCC AACCACAAAA AATCTGCCTC AATGAACAGG GTGAAGTGTG CGGGATTAGT
CTGGTTCGCA CTGAACTGGG CGAGCCAGAC GCCAGTGGCC GTCGCCGTCC GCGCCCTATT
CCCGGTTCAG AATTCGTGCA ACCTGCGGAA GCCGTGATAA CCGCATTTGG CTTCCAGTCG
CACAGCATGC CGTGGCTGGA AGAGGCCGAG ATCGGTCTGG ATAACTGGGG CTACATCACG
GCTCCCCTTA ATAATCAGAT ACCTTGCCAG ACCAATCATC CACGTATTTT TGCTGGCGGT
GATGCCGTAC GCGGTGCCGA TCTGGTGGTG ACCGCCATTG CCGACGGGCG CAAAGCCGCA
CTGGGTATGA TTGCGACAAT GGGGCTGACC GCCGTCACGG GCGCCATTCC CGCACACCCG
CAGCGTCCCG AAACGAACGC AACTCGCGAG GAGGTTCGCT CATGA
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| Protein sequence | MNRFVIASTQ DCMGCHACEI ACVISHNDEQ YPDSTTVFQP RIKAFNTPTL RAAVTCRHCE
DAPCASVCPT QALIRKDNSI QLVQEKCIGC KSCVLACPFG AMSMVTNPVD NSTVAHKCDL
CADRPEGQAC VAACPTHALQ LVSEQTLAAR RQEKQQTMAL RSASHWQRET PVLKALTTNP
LSKRKNWPRR DAEKKPLTLR TSTFDEIYHG FSVQQTEDQA DRCLSCGKRA ICEWTCPLHN
NIPELLSLAK QGRILEAVEL SHQTSSLPEI CGRVCPQDRL CEGACTLGKE YGAITIGNVE
RYITDTAMAM GWSPDMTRVV PSGKRAAIVG AGPAGLACAD VLARNGVQAV VFDRHPEIGG
LLTFGIPSFK LDKEVLIHRR EVFSAMGIEF QLNTEVGKDI SLAQLLDDYD TVFLGVGTYR
SMKANIDNEE APGVFDALPF LIANTKHVMG LPELDDEPYI SMAGKRVVVL GGGDTAMDCL
RTSVRQGAVS VTCAYRRDEA NMPGSKKEVK NSREEGVEFM FNVQPQKICL NEQGEVCGIS
LVRTELGEPD ASGRRRPRPI PGSEFVQPAE AVITAFGFQS HSMPWLEEAE IGLDNWGYIT
APLNNQIPCQ TNHPRIFAGG DAVRGADLVV TAIADGRKAA LGMIATMGLT AVTGAIPAHP
QRPETNATRE EVRS
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