| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3788 |
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| Symbol | |
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| ID | 8134775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4287831 |
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| End bp | 4288952 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644867095 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_003019339 |
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| Protein GI | 253690149 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00493314 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATCAA CGGAAATTTG GCTACGTATG ACGGGCGTAA GGCACCTGAG CGCCAGACGT
GCTCGGGCTA TTGTCAGCAA GCTTATTGAT TTAAATATGT TCGATAATGA GAGTCTGAGC
ACATTAGGTT TGTCTGATGC TCAAATTACA CAATTCTATT CTTATGAGCA TAAGATCCTG
GAAGAAACAC TCAATTGGTT GTCTTATCCC AATCATCATC TCGTGACGTG TGAAGATGCC
CTGTATCCCT TTCTGTTGAG CAATATTCGT GATTTTCCGC TGTTGCTTTT TGTGTCTGGT
TCTCCAGAGC TATTGGCATC GCCGCAAATA TCGATTATTG GCAGCCGAAG TAGCAGTGCT
TACGGCGAAC GCTGGGGAGG TTTTTTTGCT CAAGAACTTG CCGCAAATGA ACTCACAGTG
ACAAGTGGGT TAGCAATTGG CATTGATGGT ATTGCTCATC GCGCTGCTTT GGATACGGGA
GGGAGAACCA TTGCTGTGTT GGGAAGTGGG CTGGAGAATA TTTATCCTAA GCGGCACGCT
AAGCTTGCCG AACGTATTTG TGGCGATGGC GGTGCGCTGG TCTCCGAGTT TCCCCTCGCG
ATGCCGCCTT TCCCAACCAA CTTCCCCAGA AGAAATCGCA TTATCAGCGG GCTAGGGCTG
GGCGTTCTGG TCATTGAGGC GTCTATCCGT AGCGGGTCTC TGGTCACGGC GCGTTATGCT
TTAGAGCAAG GGCGGGAGGT TTTCGCTCTG CCAGGACCAA TCGGTAATCC GATGACCGAG
GGGACGCACT GGTTGATCCA GCAAGGAGCC AGTCTGGTGA CACATCCGAA GGATATTCTT
GAGCAATTGG TGAGTGAGCT ACAGTGGCTG CCAATGGAAA GCGGGCAAAC TATTTCTAAC
GAAGAAGAGG ATGGCGAATT GCCATTTGCC GACGTGTTGG CTAACGTAGG AGATGAGGTT
ACACCTGTTG ACGTTGTCGC TGAACGTGCC GGCCAACCTG TGCCAGAGAT AGTCACTAAG
CTATTAGAGC TGGAGTTAGC AGGATGGATC GCAGCAGTAC CCGGCGGCTA TGTCCGATTA
AGGAGGGCAG GCCATGTTCG ACGTACTCAT GTACTTGTTT GA
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| Protein sequence | MLSTEIWLRM TGVRHLSARR ARAIVSKLID LNMFDNESLS TLGLSDAQIT QFYSYEHKIL
EETLNWLSYP NHHLVTCEDA LYPFLLSNIR DFPLLLFVSG SPELLASPQI SIIGSRSSSA
YGERWGGFFA QELAANELTV TSGLAIGIDG IAHRAALDTG GRTIAVLGSG LENIYPKRHA
KLAERICGDG GALVSEFPLA MPPFPTNFPR RNRIISGLGL GVLVIEASIR SGSLVTARYA
LEQGREVFAL PGPIGNPMTE GTHWLIQQGA SLVTHPKDIL EQLVSELQWL PMESGQTISN
EEEDGELPFA DVLANVGDEV TPVDVVAERA GQPVPEIVTK LLELELAGWI AAVPGGYVRL
RRAGHVRRTH VLV
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