| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3688 |
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| Symbol | |
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| ID | 8134668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4162522 |
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| End bp | 4164051 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866988 |
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| Product | ABC transporter related |
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| Protein accession | YP_003019239 |
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| Protein GI | 253690049 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAA TCAATGCGGA TCAACCCATA CTTGCGCTTA GCCATATCAC TAAACGTTTT
GGCGGCAACA TTGCGGTTAA TGATGTCAGT CTTCAGGTCA TGCCGGGCGA GGTACTCGCG
CTACTGGGCG AAAATGGTGC GGGGAAATCG ACACTCATTA AAGTCCTCGC AGGTGTCTAC
CCCCGTGATG GTGGTGATAT TCAATTCCGT GGAACCAGCA TAGCGTCAGC CGCAGCGATA
AAAAGTGATG GCCTCCAGCC TATTGCGTTT ATTCATCAGG ATCTGGGGCT GATCGAGTGG
ATGACCGTGG CGGAAAATAT GGCGCTGGTC ATGGGGTTCC CACGCCGTTT TGGATTAATT
GACTGGCGGG CGATCCGCCG GCATGCCAGC CAGGCGCTAC AGGATGTGGG GATCGCACTC
GATCCCGATG CCCGGGTGTT TGAACTCTCA CGCACGGAAA AATCACTACT CGCCATCGCG
CGAGCCGTCG CCGTGAATGC CGAACTGTTG GTGCTGGATG AACCCACCGC CTCACTTCCG
GCAAATGATG TCCGCCATCT TTTTTCCGTG ATTAACCGAC TGCGTGCGAA AAAAGTGGGC
ATGATTTACG TCACTCACCG ACTGGATGAA GTGATCGACA TCGCCGATCG CGTCTGCGTC
ATGCGCGATG GCCGCTATGT CGCAGGCGGT AGAACGGCGG ATTATTCGCT GCGCGATCTG
GTGCAATTGA TTGTGGGTGA AGCCATGCCC GGCGATCAGC GCGAACCCTT ACCAGCTCCT
TCCTCTCCTG TTCTACAAGT AAAAAACGTG ACTGTAGGCG ATATCGGCCC GGTCAGCTTT
AGCCTGCAAC CGGGGGAAAT GCTCGCACTG GCTGGTCTGC GCGGCGCAGG TCAGGAAGAA
ATCGGTCGTT TGCTGTTCGG ACTACGCCAG TGCGACAGCG GAGAGATTCA GTTCCGTGAT
GAACCTTACC ATGCCAGCTC CCCACAACAG GCGATGGCTC ACGGCGTATC GCTGGTCGCA
GGCGATCGCA CCAATGAAAG TCTGGTGATG TCGATGAGCG TACGCGAGAA CCTGTTTATC
AACCCCTGCG CCAGCGGACA TAAGCTCTTT TCCCGCTACA GCCGCCGCGA AGAGATAGGA
GCAAGCTGGT GGAAAGTACA ACTGTTCGAT GTTCGCCCCA AAAACGTCAA TATCGACATC
AGTGCGTTGT CCGGTGGCAA CCAACAGAAA GTGGTGATGG CCCGCTGGAT GCACCTCGGC
GCGCCACTGC TGATCCTGGA AGATCCCACC GCGGGCGTTG ATGTCGGTGC ACGCGCCGAA
ATTTACCATC TATTGAATAA GTCACTGGCA GAGGGCGTTG CGGTGCTGGT GATCTCCAAT
GATTTCGAGG AAATCGCCCA CATTTGCAAT CGCGCACTGG TTTTCAATCG GGGACATGTC
GTCGGCGAGC TCAAAAATCA ACAGGTCTCT TTCGCCAACT TATTGGAACT GGCATCAGCC
AGCACGGGAG AAACCACGGC TTCTGCCTGA
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| Protein sequence | MNQINADQPI LALSHITKRF GGNIAVNDVS LQVMPGEVLA LLGENGAGKS TLIKVLAGVY
PRDGGDIQFR GTSIASAAAI KSDGLQPIAF IHQDLGLIEW MTVAENMALV MGFPRRFGLI
DWRAIRRHAS QALQDVGIAL DPDARVFELS RTEKSLLAIA RAVAVNAELL VLDEPTASLP
ANDVRHLFSV INRLRAKKVG MIYVTHRLDE VIDIADRVCV MRDGRYVAGG RTADYSLRDL
VQLIVGEAMP GDQREPLPAP SSPVLQVKNV TVGDIGPVSF SLQPGEMLAL AGLRGAGQEE
IGRLLFGLRQ CDSGEIQFRD EPYHASSPQQ AMAHGVSLVA GDRTNESLVM SMSVRENLFI
NPCASGHKLF SRYSRREEIG ASWWKVQLFD VRPKNVNIDI SALSGGNQQK VVMARWMHLG
APLLILEDPT AGVDVGARAE IYHLLNKSLA EGVAVLVISN DFEEIAHICN RALVFNRGHV
VGELKNQQVS FANLLELASA STGETTASA
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