Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3552 |
Symbol | |
ID | 8134532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4000036 |
End bp | 4000395 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644866853 |
Product | hypothetical protein |
Protein accession | YP_003019104 |
Protein GI | 253689914 |
COG category | [S] Function unknown |
COG ID | [COG3112] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTATG AATTTTTGCG GGATGTGACA GGCCAGGTCA TCGTTCGTAT GTCGATGGGA CATGAAGCGA TCGGGCACTG GTTCAATGAA GAAGTAAAAG GCCAGCTAAC GGTATTAACT GACGTTGAAG AAGCGGCGCG CTCTGTTGCG GGCAGTGAGC GGCAGTGGCG GCGCGTGGGT CATGAATATA CGCTGTCGCT GGATGAAGAA GAAGTGATGG TGCAGGCAAA TCAGCTGTCT TTTACCACGG ATGAGCTGGA AGAAGGCATG AGTTATTACG ACGAAGAGAG CCTGTCTTTA TGCGGCCTGG ATGATTTTCT GACGCTGGTG GAAAAATACC GCGAGTTCGT CCTGCATTGA
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Protein sequence | MDYEFLRDVT GQVIVRMSMG HEAIGHWFNE EVKGQLTVLT DVEEAARSVA GSERQWRRVG HEYTLSLDEE EVMVQANQLS FTTDELEEGM SYYDEESLSL CGLDDFLTLV EKYREFVLH
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