Gene PC1_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3552 
Symbol 
ID8134532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4000036 
End bp4000395 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content51% 
IMG OID644866853 
Producthypothetical protein 
Protein accessionYP_003019104 
Protein GI253689914 
COG category[S] Function unknown 
COG ID[COG3112] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATG AATTTTTGCG GGATGTGACA GGCCAGGTCA TCGTTCGTAT GTCGATGGGA 
CATGAAGCGA TCGGGCACTG GTTCAATGAA GAAGTAAAAG GCCAGCTAAC GGTATTAACT
GACGTTGAAG AAGCGGCGCG CTCTGTTGCG GGCAGTGAGC GGCAGTGGCG GCGCGTGGGT
CATGAATATA CGCTGTCGCT GGATGAAGAA GAAGTGATGG TGCAGGCAAA TCAGCTGTCT
TTTACCACGG ATGAGCTGGA AGAAGGCATG AGTTATTACG ACGAAGAGAG CCTGTCTTTA
TGCGGCCTGG ATGATTTTCT GACGCTGGTG GAAAAATACC GCGAGTTCGT CCTGCATTGA
 
Protein sequence
MDYEFLRDVT GQVIVRMSMG HEAIGHWFNE EVKGQLTVLT DVEEAARSVA GSERQWRRVG 
HEYTLSLDEE EVMVQANQLS FTTDELEEGM SYYDEESLSL CGLDDFLTLV EKYREFVLH