| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2819 |
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| Symbol | |
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| ID | 8133772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3190430 |
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| End bp | 3192796 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866107 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_003018385 |
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| Protein GI | 253689195 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCACA AAACAGGTGC CTTTCTCCTG CTCATGTGCG CCCCGCTTGC GCTGTTTTAT
TCTGCGACCC TTCTCGCGGA AGAGTATACC GATCTCCCCG CGCCCCCCAG CGCGATGCCC
TCGCTCAGCG AATCCGTCTA TTATTTAACG CTTTCCGTCA ACGGACAGAG CGATAACGCG
GTAGTCCCTG TCACGTATCG TGCCGGGAAC TATTATGTGA ATGCGGCCGC GCTGCGCCAG
AATCACATTC GCCTGTCAGA GCAAAGCGTG GAGCTGGTCA ATATCAGCGA TCTGCCAGAC
GTCACCGTCG ATTACGATCA GGCCATACAG CAGCTAAAAC TCACCGTGCC CATGCACTGG
CTACCCGAGC AATCCGTTGA AGGCGGAGGG CAGAATATGG CGCGCCTTCC CGCTCGCACC
AGTCCAGGCC TGTTATTCAA CTATAACCTT TATTACACCT CGCCCCGCAG CAGTTCGGAC
TCGCTCAGCA GTTGGATGGA ACAGCGCTTT TTCAGCCCCT ACGGAACCCT ATCCAATACG
GGGATCTACT ATTTCACATC GGGCAATAGT ACCTCGCAGC AAGATGGCTA TCAGCGCTTC
GATACCTATT GGCGTTATAA CGATAACGAA CGCATGCTCA CCTATCAGGT TGGCGATCTG
ATTAGCAACT CCCTGACGTG GAGCAACTCG GTGCGTATGG GCGGCCTGCG TGTCGCCCGC
AATTTCGGCC TTCGCCCGGA TATCGTGACC TATCCAATGC TGCAATACAC CGGTACGGCC
GCCGTACCCA GCACGCTTGA CTTGTTTATT AACGGTTATA AAGCCAACAG CACGAACCTG
AACGCGGGTC CGTTCACCCT CACCAATACG CCTTACCTGA ATGGCGCAGG GGAAGCGACG
GTGATTACCA CGGACGCTCA AGGGCGGCAG GTTTCTACCA CGATTCCTTT TTATGTCTCC
AACGCCTTGC TGCGGGAGGG ATTAAGCGAT TTCGATCTGT CCGTTGGTGT TTTGCGCCGG
GACTATGGGA TACAGAATAA CTCCTACACT GACGATCCTG CCGTCAGCGG CATCTATCGC
TACGGGCTGA CCAATAAGCT GACGGTATCG ACACATGGCG AGGCCGTACA GGATCTGTAT
CTACTCGGCG CAGGGGTGGA CTTTACCGTG GGTCGCTGGG GCACGCTGAG TTCCTCTTAC
AGTCAAAGTG AAAAGGAAGC CACCGGACAC CAATACACCA CGGGCTACTC TTACTACAGT
TCCGCATTTG GCCTGAGCGT CCAACACGCT AAACGCAGTG AAAAGTACCG CGATTTAGCC
TCCGTGCTCA CAGAAGGCCG CCTCAGTCGG GAAAGCTATC AGGCGACGCT CAGCAGCCAG
TTGTTTGGTG AAGGCAATGG GTCGTTCGGT GTGGGTTATT TCGATATCCG CTCGTACGAT
TCAACCCGTA CCCGTCTGCT GAATCTCTCT TTCAGCCGTC AGGTCTGGCA AGACAGCTCC
ATTTACCTCG CCTTTAACAA AGCGCTGGGA GGAAACGGCT ACAGCGCCCA ACTCCAGTTC
GTGATGCCTT TTGGTCGCAA CGGCAGCATC AATGCCGGGG TCCAGCGTGA CAGCAATGGC
GATTACTCAC CGCGCATTGG AGTGAACCGC ACCACGCCGA CAGAAGGCGG ATTAGGCTGG
AACGCCGCCT ATGGCGCAGG CAGAAACCCT TATCATCAAG GGGCGCTGAA CTGGCGCGGC
CCTTATGCCA TGCTTGCTGG CGGGACGTAT GGCAATGAAG GCAATATGAC ACAGTGGGGG
GAACTGAGCG GCTCGCTAAT CTACATGAAC GGGGGGCTTT TCCCCAGCAA CCGCATCAAC
GATGCCTTTA TTGTGGTCGA TACCGAAGGA TACCCCGATG TCCCGGTGAA ATATGAAAAT
CAGCTCGTGG GGAAAACCAA CAAAAACGGC CACTTACTTG TCCCGTGGGT CGTGTCCAAC
TACCCGGCGA AAGTGGAAAT CGATACGCTA CAACTGCCAG CCAACGTCAC GACACCTCAG
GTGGAATCAC GCGTGGCAGT CAAAGAAGGC AGCGGCACCA TCGTGAAATT CCCCGTTCAT
GTCGTGCGTT CCGCCAACAT CAGGCTGCTC AATTCGGAGG GCAACCCGCT CACCATCGGC
ACCTGGATCA CCGACGAAAT CAGCGGCGAC ACCACGATCA GCGGCTACGA TGGTCTGGCC
TACTTCGCCA ATCTGAGCAC CGCTAATCGC TTACGCTTTA AACAAGAAGA CGGACGGCTT
TGCCGGGTGG AATTCTCGCT GCCGGAATCT CAGAACATGA TGGCGACCAT CGGCCCGCTC
ACCTGCCAGA CTGACCCAAA AGGATAA
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| Protein sequence | MTHKTGAFLL LMCAPLALFY SATLLAEEYT DLPAPPSAMP SLSESVYYLT LSVNGQSDNA
VVPVTYRAGN YYVNAAALRQ NHIRLSEQSV ELVNISDLPD VTVDYDQAIQ QLKLTVPMHW
LPEQSVEGGG QNMARLPART SPGLLFNYNL YYTSPRSSSD SLSSWMEQRF FSPYGTLSNT
GIYYFTSGNS TSQQDGYQRF DTYWRYNDNE RMLTYQVGDL ISNSLTWSNS VRMGGLRVAR
NFGLRPDIVT YPMLQYTGTA AVPSTLDLFI NGYKANSTNL NAGPFTLTNT PYLNGAGEAT
VITTDAQGRQ VSTTIPFYVS NALLREGLSD FDLSVGVLRR DYGIQNNSYT DDPAVSGIYR
YGLTNKLTVS THGEAVQDLY LLGAGVDFTV GRWGTLSSSY SQSEKEATGH QYTTGYSYYS
SAFGLSVQHA KRSEKYRDLA SVLTEGRLSR ESYQATLSSQ LFGEGNGSFG VGYFDIRSYD
STRTRLLNLS FSRQVWQDSS IYLAFNKALG GNGYSAQLQF VMPFGRNGSI NAGVQRDSNG
DYSPRIGVNR TTPTEGGLGW NAAYGAGRNP YHQGALNWRG PYAMLAGGTY GNEGNMTQWG
ELSGSLIYMN GGLFPSNRIN DAFIVVDTEG YPDVPVKYEN QLVGKTNKNG HLLVPWVVSN
YPAKVEIDTL QLPANVTTPQ VESRVAVKEG SGTIVKFPVH VVRSANIRLL NSEGNPLTIG
TWITDEISGD TTISGYDGLA YFANLSTANR LRFKQEDGRL CRVEFSLPES QNMMATIGPL
TCQTDPKG
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