Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2366 |
Symbol | |
ID | 8133310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2722776 |
End bp | 2723819 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644865646 |
Product | Alcohol dehydrogenase GroES domain protein |
Protein accession | YP_003017933 |
Protein GI | 253688743 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0010665 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAG CAGTATATGA TGGCAATGGA AAAATTTCAT GGAAAGAAGT GAAGGATGCA ACACTAGAAG AAAATACTGA TGCTTTAGTA AAAATAATAA AAACCACTAT TTGTGGCTCA GACTTACATA TATTGAAAGG AGATATGCCG TACGTACCCA GTGGTAGAGT ATTGGGACAC GAAGGTATAG GTGTTGTAGA AGAAATTGGA GAGGCGGTAA CTCAATTCAA AAAAGGTGAT AAAGTTGTTA TTTCTGCAAT TTCATATTGT GGAAAATGTC ACCATTGTAA AAAAGGCCTA TATTGCCACT GTGAGTCCAA AGATGGTGGA TGGGTTTTAG GTAACTCTGT CAACGGTACT CAAGCTGAAT ATACTCGGAT TCCGCATGCA GATAATTCGT TGATTAAAGT ACCAGAAAAC GTAGATGAAG AGTCAGCACT GATGTTAAGC GATATCCTGC CGACAGGGTT TGAAGTTGGA GTCCTGGCAG GCGAAGTTAA ACCAGGTCAA AAAATTGCAA TTATTGGTGC TGGTCCAGTT GGACTATCTG TACTCATCAC ATCTCAATTC TATTCTCCAG CCAAAATAAT TATGATTGAT ATGGACAAAT CCAGATTAGA AATGGCAAAA CAGCTTGGGG CAACTCATAC AATAAATCCC CAATCAGATG ATTATGCATC CATATGTAAA GAACTAACTG ATGGATACGG TGTTGATGTC GCTATTGAAT GTGTTGGCAT ACCAGACACG TTTGAAATGT GCCAAGAAAT AATAGCCAAA GGTGGAAGAA TCGCTAATAT AGGCGTTCAT GGTAAAAAAG TAGATTTACA CATGGATAAA CTATGGGGAA GTAACATACA GATAACGACT GGTTTTGTAT GCACTCATAG CACACCAATG CTAATGGAAA GTATTTCTTC AGGGAAAATA GATCCCAAAA AGTTAATATC TCACCATTTT AAGCTGGACG AAATTGAAAA GGCATATCAG GTCTTTGGAA ATGCCGCCAA AGAAAAAGCC ATCAAAATAA TATTGAGTAA ATAA
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Protein sequence | MKAAVYDGNG KISWKEVKDA TLEENTDALV KIIKTTICGS DLHILKGDMP YVPSGRVLGH EGIGVVEEIG EAVTQFKKGD KVVISAISYC GKCHHCKKGL YCHCESKDGG WVLGNSVNGT QAEYTRIPHA DNSLIKVPEN VDEESALMLS DILPTGFEVG VLAGEVKPGQ KIAIIGAGPV GLSVLITSQF YSPAKIIMID MDKSRLEMAK QLGATHTINP QSDDYASICK ELTDGYGVDV AIECVGIPDT FEMCQEIIAK GGRIANIGVH GKKVDLHMDK LWGSNIQITT GFVCTHSTPM LMESISSGKI DPKKLISHHF KLDEIEKAYQ VFGNAAKEKA IKIILSK
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