| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2350 |
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| Symbol | |
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| ID | 8133294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2699539 |
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| End bp | 2700510 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644865631 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_003017918 |
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| Protein GI | 253688728 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTTCTG TCGATAATGC TTACGTCTAT TCCGTTCATC TCATGGGTAG CCCCATTCTG
CTCAAACTCT TTGTTCATGA TGAAACCGCT GTCAGGCAAG TTTTCCTGCG CATCAAGCAG
CTTGAAGACC TGCTAACCGT TAATCGGGCG CAGTCGGAAG TGATGAGTAT CAATCACGCG
GCGGGAAAAG CGTCTGTGCC GGTCAGCCCG GTTGTCTTTG CGCTGATTAA GCGCGCTAAA
GCGGTGAGTC TGATTGAAAA TAGCGGCTTT AATGTGGCGA TAGGCCCCGT CGTCAAACTC
TGGAAAATCG GTTTTAGCGG CAGCACGGTG CCTGACAGCG AATCGATACA AGGAGCGCTG
GCATTAACAC ATCCCGAGCG CATTATTCTC AGAGAGCAGG ATTGCGCCGT GTTGCTAGAA
AGCGCCGGAA TGGAGATCGA TCTGGGGGCG ATTGCGAAAG GTTATATTGC CGATATCGTC
CGGGATGTTC TGCATCAACA TGCGATTCAG GATGCGCTGA TCAATCTGGG GGGGAACGTG
CTGGCTATCG GCAGCGCGCT GACGGATGAG CAAGGGCTAT GGAGCGTCGG GTTACAGAAG
CCTTTTGCGG ATCGCGATAG CTTGCTTGGC ATCATTAAGG TGAAGAACAA ATCCGTGGTG
ACATCTGGCG TTTATGAGCG CTTTTTTACC GTGGACGATC GCATCTACCA TCATATTATC
GATCCTCGGA CGGGTTATCC GCTGGATAAT GAACTGCACA GCGTAACGGT TATCTCGAAT
GATTCTCTCG ACGGTGATAT CTACACCACG CTGCTCTACG GCATGGGCGT GAACGCGGGC
ATTGAGTTTC TACAACATCA GCCGGACATT GAGGCCATCT TTGTGACGAA GAGTAAAGAG
ATAATCTTTT CTTCTCAGCA ACATCATACG TTTGAATTGC TGGATAAGGA TTATTCGGCG
ACTATACGGT GA
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| Protein sequence | MPSVDNAYVY SVHLMGSPIL LKLFVHDETA VRQVFLRIKQ LEDLLTVNRA QSEVMSINHA
AGKASVPVSP VVFALIKRAK AVSLIENSGF NVAIGPVVKL WKIGFSGSTV PDSESIQGAL
ALTHPERIIL REQDCAVLLE SAGMEIDLGA IAKGYIADIV RDVLHQHAIQ DALINLGGNV
LAIGSALTDE QGLWSVGLQK PFADRDSLLG IIKVKNKSVV TSGVYERFFT VDDRIYHHII
DPRTGYPLDN ELHSVTVISN DSLDGDIYTT LLYGMGVNAG IEFLQHQPDI EAIFVTKSKE
IIFSSQQHHT FELLDKDYSA TIR
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