| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2046 |
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| Symbol | |
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| ID | 8132990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2350948 |
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| End bp | 2352435 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865336 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003017623 |
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| Protein GI | 253688433 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.838973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG AGAATAACCA GAAACAAACG CCTGTCCCAC ATCGCCACTG GATTTTGATT
GCCTGTATGC TGGCCATGTT TACGGCGGCG ATTGAAGTGA CGATTGTCGC CACGGCGCTG
CCCACCATCA TCGCGGATTT AGGCGGATTC TCCCTATTAG GGTGGGTTTT TGCGGGTTAT
TTGCTGACAC AATCAATCAG CATTCCGATT TATGGCCGCC TTGCCGATCT CTATGGCCGC
AAAAAGATTT TCTTCTTCGG CATGATGGTA TTCCTGCTGG GATCGGTTCT GTGCGGATTT
TCGACACAGA TGGGCTGGCT GATTGTCTTC CGTACCTTGC AAGGGTTGGG CGCAGGCGCG
ATAACCCCGA TTGCATTCAC CATTGTTGCC GATGTATACA GCTCGAGCGA ACGCCCGAAA
ATACAGGGTT ATCTATCCAG CGTGTGGGGT GTTTCCGCGA TTATCGGCCC GCTGTTGGGC
GCGTTTATCG TCCAACACTT CAACTGGGCA CTGGTTTTCT GGGTCAATGT GCCGATTGGA
CTGTTTTCCA TCTTCCTGCT GGCTCGTTAC CTGCCGACGA TCAACGCCGT GCGCCAGCAC
CAGTTGGACT GGGTGGGGGC GTTCTATCTG GTTGTGTCCG TCGCCAGCCT GCTGATGGCG
CTGCTACAGG CTGAGGTGTT TGGCTACTGG GTCATCCCGC TGCTTGCGAT TTCTGCGGTG
GGCTGCATCC TGCTAGTTCG ACAGGAAAAA CGTACGGCTG AGCCGCTGTT CCCGCTGGCA
CTCTGGCGCA ATCGGGTCAT TATCGCCGGT AATCTCGGGG GATTAGTCGT CGGGGCTGCG
ATGATGGGCG TGAGCGCTTT TCTGCCGACG TTTATTCAGG GTGTGATGGG TAAAACGCCG
CTGGAAGCAG GCAGTATATT GGCGATGATG TCGATTGGCT GGCCGCTGGC CAGTACGCTG
AGCGGACGCT TAATGCTGTG GACGTCTTAT CGCTTTACGG CAATGCTCGG CGGTATTGTG
CTGATTATCG GTAGTCTGAC GCTGTTAACC GTTCAACCAG ACAGCAATCT CATGTGGGCG
CGGCTAGCGG CATTTCTGAT CGGTTCGGGA ATGGGGCTGA GCAGCACCAC GTTTCTGGTA
TCGATACAAA ACTCGGTGGA TTACTCTATC CGCGGCATTG CGACGGCTTC CGCCATGTTT
ACCCGCATGC TGGGTTCCGC GTTGGGAACC GCAATTCTTG GCGCCACGCT GAACATCAAT
CTACACTGGC GATTGCCGGA CGTGAGCGAT CCACTCCAGA CTCTCATGGA TCCGGCCAAG
CGTATCCTAC TGAGCGTAAA CCAGCTCGAT ACACTGGCCT CGCAAGTCGC CTCGTCAATT
CATGGCGTAT TTATCGTTTC CGCACTCATC GCTGCTATCA CACTGCTTTC CGCCAGAATG
ATCCCCGCAA GCCAGCGCCC AGGGCAGGTT GAAACCAGAG AGAAATGA
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| Protein sequence | MKTENNQKQT PVPHRHWILI ACMLAMFTAA IEVTIVATAL PTIIADLGGF SLLGWVFAGY
LLTQSISIPI YGRLADLYGR KKIFFFGMMV FLLGSVLCGF STQMGWLIVF RTLQGLGAGA
ITPIAFTIVA DVYSSSERPK IQGYLSSVWG VSAIIGPLLG AFIVQHFNWA LVFWVNVPIG
LFSIFLLARY LPTINAVRQH QLDWVGAFYL VVSVASLLMA LLQAEVFGYW VIPLLAISAV
GCILLVRQEK RTAEPLFPLA LWRNRVIIAG NLGGLVVGAA MMGVSAFLPT FIQGVMGKTP
LEAGSILAMM SIGWPLASTL SGRLMLWTSY RFTAMLGGIV LIIGSLTLLT VQPDSNLMWA
RLAAFLIGSG MGLSSTTFLV SIQNSVDYSI RGIATASAMF TRMLGSALGT AILGATLNIN
LHWRLPDVSD PLQTLMDPAK RILLSVNQLD TLASQVASSI HGVFIVSALI AAITLLSARM
IPASQRPGQV ETREK
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