| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1522 |
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| Symbol | |
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| ID | 8132463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1774643 |
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| End bp | 1776748 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864811 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003017101 |
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| Protein GI | 253687911 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACTT TACTCGCATT GATGCCATGC GTGCTGATTG CTCCGGCGTA TGCACAGGAT
GACACGACCA AAAAGGATGA GACGAGCGGT GATGAGATGG TGATTACCGC CTCACGCTCG
AATATCCAGC AGCAGAAAGC GCCGCAGGTG GTCACGGTGA TCACTAAAGA GCAAATTGAG
CAGCAGATGC AGGTCACCTC CGACTCGTCG CAAATTCTGA GCAATCTGCT GCCTTCGTTC
TCCCCCAGCC GTCAGAAAAT GAGCGGCAGT GGTGAAACCT TCCGCGGTCG TGCACCTCTG
GTGATGATCG ACGGTATTCC GCAATCTAAC CCGCTGCGCC CGACCGGGCG TGAAATGCAC
ACTATCGATT TTTCGATGGT CGAACGCGTA GAAGTGATTC ATGGTGCCAG CGCTACCAAC
GGGTTAGGCG CTCTGGGGGG CGTGATTAAT ATCATTACCC GTCGACCGGA AAACGGCTCA
TTTAATCAGC ACGTCAACGT ACAGACCACG CTCCCGACGG AGAAGATTCG CGGTGAGACC
GCCAGCTATA AAACCACCTA TCGGGTCGAT GGACGCGAGG ACTATCTCGA TTACCTGTTC
TCGATTGGCT ATGAGAATCA GGGACTGTAT CTGGACGGCA ACAACCGACC CGTCGGCGTA
GATAATACGC AGGGCGATAC CATGGATTCA CGCGCTTACG ACCTGTTAGC GAAAGTCGGG
TACTGGCTGG ATGACTATCA GCGCATTCAA CTGAGCGTGA ATCGCTACCA CATCAAAGGC
GAAAATAACT ATCTCAGCGT GGATGGCGTG CGCAGACTCG GCATTCCGAC AACGTCGGTA
CGTGGCACAC CGCCGGGTGA GGCACCAAAT AACAGTATTT GGACCTCTGG GTTAACCTAC
GAACACCACG ATCTGGCAGG AATGAAACTG TCGGCGCTGC TTTTTAATCA GCGTTATGAA
GCATTATTTG GTGCGACGAA TTCATCCTCT TTTCAGGATC CGACGATTGC TGCAACCGGA
ACGCTTTACG ATCAATCCCG ATCGGTTGCC AATAAGTACG GTACTAAACT GGCGCTGACC
AAAGATGACC TGCTGGATGA CACGCTGAAA GTCACGGTCG GTTTCGATAC GCTGTACGAT
AAGGGCAAGC AGGATTTGTA TCTGACCAAA CGTACCTACG TGCCGGAAAT GGAATACACC
AGCTATTCAC CGTTTATTCA GGGTGAATAT CAATTATTGG ATAATCTGGT GCTGCATGGT
GGTGTACGCC ACGAAGCCGC GAAGCTAAAA GTAGACAGTT TTCAGGCTGT GGCAGCGAAT
AACCGCGTAG CTGTCGAGGG TGGATCGTTG AAGTTTAACG AAACGCTTTA TAACGCCGGA
GCGGTGTATT CCATTACCGA CTCAGTCGAT CTGTTTGCCA GTTATTCCGA AGGTTTTGGA
ATGCCGGAAG TTGGGCGTGT ACTGCGTGCT ATAGATAATC CAGGCGTTAG TCTGAGCGAT
TTTACTGACC TGCAACCGAT TGTCACCAAT AACGTGGAAA CGGGATTCCG GGTTAAAAAA
GATCGCTTTG ATTTTGAGGC CAACTATTAC CAGTCCAACG CTAAAATGGG CGATCGTGTA
GAGGCGCGAG GCGATACCTT TGTCTCTGTG CGTGAAAAAA CGCGTATTCA AGGCTTCGAA
GTCAAAGCAG GCTATCAGAT CAACGAGCGG CACAAGGTGA ATGCTTCCTA CGCACACAGC
GAAGGGAAGT ATGACAGTAA CGGCGATGGC AAGCTGGATA AAAAACTTAA CGGCCTGAAT
ATCGCGCCGG ATCGCCTGAT TACCAGCTGG TCGGCGAATT GGAACGACCA ATGGAGCTCA
TTCGTGCAGG CTAATTATGC TTTTGGCCGC AGCTTTGACG ATGCGGGTAT GGCGTTTGAC
GGCTACCTGT TGATGGATGC TGCCGTGGGT TACAAGCTGC CATATGGTCG CCTCAATGTC
GCGGTGGCTA ACCTGCTGGA TAAACAGTAC ATCACCTACT ATTCGCAGGC GGGGCTTGTT
AACGATACGC GTTATTTCTC TGGACGCGGT CGCACGGTGA CGCTGGGTTA TTCGATTGAT
TTCTAA
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| Protein sequence | MRTLLALMPC VLIAPAYAQD DTTKKDETSG DEMVITASRS NIQQQKAPQV VTVITKEQIE
QQMQVTSDSS QILSNLLPSF SPSRQKMSGS GETFRGRAPL VMIDGIPQSN PLRPTGREMH
TIDFSMVERV EVIHGASATN GLGALGGVIN IITRRPENGS FNQHVNVQTT LPTEKIRGET
ASYKTTYRVD GREDYLDYLF SIGYENQGLY LDGNNRPVGV DNTQGDTMDS RAYDLLAKVG
YWLDDYQRIQ LSVNRYHIKG ENNYLSVDGV RRLGIPTTSV RGTPPGEAPN NSIWTSGLTY
EHHDLAGMKL SALLFNQRYE ALFGATNSSS FQDPTIAATG TLYDQSRSVA NKYGTKLALT
KDDLLDDTLK VTVGFDTLYD KGKQDLYLTK RTYVPEMEYT SYSPFIQGEY QLLDNLVLHG
GVRHEAAKLK VDSFQAVAAN NRVAVEGGSL KFNETLYNAG AVYSITDSVD LFASYSEGFG
MPEVGRVLRA IDNPGVSLSD FTDLQPIVTN NVETGFRVKK DRFDFEANYY QSNAKMGDRV
EARGDTFVSV REKTRIQGFE VKAGYQINER HKVNASYAHS EGKYDSNGDG KLDKKLNGLN
IAPDRLITSW SANWNDQWSS FVQANYAFGR SFDDAGMAFD GYLLMDAAVG YKLPYGRLNV
AVANLLDKQY ITYYSQAGLV NDTRYFSGRG RTVTLGYSID F
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