| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1459 |
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| Symbol | |
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| ID | 8132398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1708862 |
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| End bp | 1710097 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644864749 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003017041 |
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| Protein GI | 253687851 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.135074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATTA ATCAACCAGA CGAACCAGAG CAGGCCAAAC CGGGCATCAC CCTCACACTG
GCGCTCGCAA TACTGTCAGC CTCGCTGGGA ACAAGCATTG CCAACATCGC CCTTCCAACG
CTGACGGAAA CATTCTCTGC GCCATTTGCG CAAGTTCAGG CCGTCGTCAT CGCCTATCTT
GCCGCTATGG CGCTTTCCGT TGTGATCGCG GGTCGCCTTG GCGATCGCTA TGGGCTGAAG
CCGGTTTTCG TTGCAGGTCT TGGCCTCTTC GCCGTTGCAT CGCTGCTGTG TGCCATCGCT
CCCCACCTGT GGCAACTTAT CGGTGCAAGA GCGCTTCAGG GGATCGGTGC CGCCTTCCTG
ATGACGCTCG GCATGGCACT GCTGAGGCAG ACGGCTGGTG AAAATCATGT CGGACGAGCG
ATGGGGATAC TGGGAACGGT ATCCGCACTG GGAACCGCGC TTGGCCCTTC TGTCGGCGGC
TTCCTGCTTA CGGCAGCAGG ATGGCGTAGC CTATTCTGGG TACAGATCCC ACTGGTCACG
ATCGTCCTGT TTCTGGCTTT CACCCAACTG CCAAACACCC CAGTTAACAA GAAGGCGCAA
CGTTCAGACG CCCCATCAAC TCGGAAAATC TCACTTTTGC CGCATCTCAC GATCAATGCG
GCCATCGCCT CTGTCATGAT GACGACGTTA ATCGTCGGTC CCTATTATCT TGGTCTGGGT
CTGGGCTTAC AGGAAACGCG GGTAGGCGTG GTGATGGCCA TTGGCCCCGC TATTGCGATT
TTCTGCGGCA TTCCGTCAGG GCGACTGGTC GATACCTGGG GGTTTGGACG GGCTCTTACC
GGCGGGATAA CCCTCGTGGT TACCGGCACC TTTATGCTGG CGATCTTGCC TAATCTGTTC
GGCGTCGCGG GATACATCCT TGCCATTATT GTCCTGACGC CAGGCTATCA GCTCTTTCTG
GCGGCAAACA ACACCGCCAC TCTTGCCGAG GTTCCCGGGC ACCAACGCGG TACGGTATCC
GGCCTGCTTA ACCTGTCGCG CAATCTTGGG TTGATCGCCG GAGCCTCGCT CATGGGGCAG
GTTTTCTCTC TGGGTGTCGG CACGGAAGAT TTTGTCCATG CCACGCCCGC AGCCCTCGCG
AATGGCATGC AGCTCACCTT CTTTCTGTCT GGCGGCATCA TCGTTGCCGC CATCGCATTC
TTCCATCTGC CAAGGTGGAA ACGGGTTCCC CAATAA
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| Protein sequence | MIINQPDEPE QAKPGITLTL ALAILSASLG TSIANIALPT LTETFSAPFA QVQAVVIAYL
AAMALSVVIA GRLGDRYGLK PVFVAGLGLF AVASLLCAIA PHLWQLIGAR ALQGIGAAFL
MTLGMALLRQ TAGENHVGRA MGILGTVSAL GTALGPSVGG FLLTAAGWRS LFWVQIPLVT
IVLFLAFTQL PNTPVNKKAQ RSDAPSTRKI SLLPHLTINA AIASVMMTTL IVGPYYLGLG
LGLQETRVGV VMAIGPAIAI FCGIPSGRLV DTWGFGRALT GGITLVVTGT FMLAILPNLF
GVAGYILAII VLTPGYQLFL AANNTATLAE VPGHQRGTVS GLLNLSRNLG LIAGASLMGQ
VFSLGVGTED FVHATPAALA NGMQLTFFLS GGIIVAAIAF FHLPRWKRVP Q
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