| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1195 |
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| Symbol | |
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| ID | 8132124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1393086 |
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| End bp | 1393565 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864477 |
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| Product | putative metalloprotease |
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| Protein accession | YP_003016779 |
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| Protein GI | 253687589 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGG TGATTCTCGA TTTACAAATC GCCAGCGAGC AAGCACAGGG GTTACCGGAA
GAGAAAGACT TTCAGCGCTG GCTGGAAGGC GTTCTGCCAC AGTTTCAGGA AGTCTCTGAA
GTCACCATCC GTATCGTGGA TGAGGCCGAA AGCCGCGACC TGAATAACAC CTACCGCGGG
AAAGACAAGC CGACCAACGT GCTGTCGTTT CCTTTTGAGG CTCCGCCTGA GGTCGAACTT
CCTCTGCTTG GCGATTTAAT CATCTGCCGT CAGGTTGTCG AACAAGAAGC CGCAGAGCAG
GAAAAAACTG TAGAAGAGCA CTGGGCGCAC ATGGTTGTCC ATGGTAGCCT GCATCTGCTA
GGGTATGACC ATATCGAAGA CAGCGAAGCC GAAGAAATGG AAGCGCTGGA AACCGAGATT
ATGCAAAGTA TGGGCTATGC CGATCCTTAC CTTGCAGAAA AAGATGGCCT CACCGAATAA
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| Protein sequence | MSQVILDLQI ASEQAQGLPE EKDFQRWLEG VLPQFQEVSE VTIRIVDEAE SRDLNNTYRG
KDKPTNVLSF PFEAPPEVEL PLLGDLIICR QVVEQEAAEQ EKTVEEHWAH MVVHGSLHLL
GYDHIEDSEA EEMEALETEI MQSMGYADPY LAEKDGLTE
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