| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0582 |
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| Symbol | |
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| ID | 8131501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 678199 |
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| End bp | 678813 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644863862 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003016173 |
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| Protein GI | 253686983 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATGTTG TTATTATTGA CAAATCCCCT GTTTTTATTC AGGGCTTATC TGTTGGGCTG
AATGATTTTA TTCACGATGT CAATATTGTT GGCGTAAAGG AAATTGACGA TGTATGGTCT
TGCCTTGAGG GGATGAAAAA CGCTTTTATT TTACTAAATT GTAATAAAGA AAATGGAGAG
TACAGTTTTT TCCTTGAAAC TCTGCATGAG AAATATATTG GTGTCAGTGT GATTATTATG
GTTGATGCTA TTGAAAGACA TATTTTGAAT AACTATCTGA AGCACCATGT TATGGGGGTC
GTTCTTAAAA CATCTCCCGT TGATTCTATT GCTCAGGCAT TAAAAACAGT GTCAATGGGT
ATGGTCTGTT TACCGGATGA TGGCGTGATC TATGAAGGAT GGAGCGTCGA TAACAGTGTA
AAAGGCAAAC TGAGTGAAAG GCAGCATGAA GTGCTACAAC TGATTGCATC AGGCGCTTCT
AATAAACAGA TTAGTCGGAC ATTAAACATC AGCGCAGGAA CCGTGAAGTC GCATTTGGAG
TCGATTTTCA GGCGACTTAA TGTGCGTAAC AGAACGCAGG CTGCGATCGT ACTATTAGAA
GAAGAACGAA GATAA
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| Protein sequence | MNVVIIDKSP VFIQGLSVGL NDFIHDVNIV GVKEIDDVWS CLEGMKNAFI LLNCNKENGE
YSFFLETLHE KYIGVSVIIM VDAIERHILN NYLKHHVMGV VLKTSPVDSI AQALKTVSMG
MVCLPDDGVI YEGWSVDNSV KGKLSERQHE VLQLIASGAS NKQISRTLNI SAGTVKSHLE
SIFRRLNVRN RTQAAIVLLE EERR
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