| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0556 |
|---|
| Symbol | |
|---|
| ID | 8131474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 644855 |
|---|
| End bp | 645229 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644863835 |
|---|
| Product | MuA-transposase/repressor protein CI DNA-binding |
|---|
| Protein accession | YP_003016147 |
|---|
| Protein GI | 253686957 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000035991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAG AATGGTTTGC AACAAGTGAG CTGGTTGGCG TAGGTGGTTT GCCGAAGTCA
CCGCAGGGGC TGAACAAACG GGCGCGAGAC GACGGTTGGG AAAAGCGCAG GCGGAAAGGA
GTTCAAGGGC GTGGTGTCGA ATATTCTATT CGCAGTTTGC CGAACGAGGT CAGGAACTCT
CTGCTAGTAA AAGAGAATCC GCCAACAGAA TATTATCGTA TCGATAATGA GCCAACGCTG
CTGTCATCGT GGGTGCATAT TTTCCATCAA CTTTCCGTTG ATGAACGAAC CCGACTGATT
AATTTCATCT TGCGTGAAGG GACGATAGCG ATGTTGTCTC GGCTGGATGA TGTCACCATC
GACCAGACTG CCTAG
|
|---|
| Protein sequence | MDKEWFATSE LVGVGGLPKS PQGLNKRARD DGWEKRRRKG VQGRGVEYSI RSLPNEVRNS
LLVKENPPTE YYRIDNEPTL LSSWVHIFHQ LSVDERTRLI NFILREGTIA MLSRLDDVTI
DQTA
|
|---|
| |