Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0493 |
Symbol | |
ID | 8131409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 578523 |
End bp | 579746 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644863770 |
Product | abortive infection protein |
Protein accession | YP_003016084 |
Protein GI | 253686894 |
COG category | [R] General function prediction only |
COG ID | [COG1106] Predicted ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAT GGTATCGTTT TAAAAACTTT TACTCGTTTA AGGATGAGCA ACTAGTTGAC CTTACTTTGA AGGCTAACTC TTCAACATCG TCTTTGGACG AACCTTGGCT TGATACCCGC ATAACTAAAG TATTAGCTGT GATGGGAGCG AATGGTTCTG GTAAATCAAA CATGCTTAAA CCTTTGGCCT TCTTGAGTTG GTTTTGCAGT GAATCATTTA AATCAATGGA TAACTCAGAC TATCTACCGA TTTATCCGCA TATTTGTAAT AAAAAAGACC CATCAGAGAT TGAAATATAC TTTGTTGATA GTAGAACTGT CGAAGATGAA ATTCATAACT TTGAATTTAA ATATTTATTG AAATTCAATA AAAAAAGAGT TTTACATGAA GAGTTAAAAT ATAAGACTAG TAGATTGTTT TCATCCATTT TCTATAGGAA ATATGATGAA TTAACTAATT CTTATAAAGT GAAAAGTGCT GGTGATGACT TCAATATCAG TGAGCTAAAA ACAGTGCCGC AGAATGCTTC TGCCATTTCT TACTTTAGAA GAAAAGGTGA CAATATTATT GCTGATGCAA TGCATCATAT TTTTTATAGT ATCGAAAATA ACCTGAATGC TTTTGGTAAG GCTAATTTTG ACTATGGGAA AGTTTTGAAA GCTACAGAAT ATTATAGTGA AGAGCCTGAT ATTTTTGAAA AAGCGAAAAA GTATCTAACG AGAATGGATT TTGGTCTGGA TGATATAATA ATAAAATCAG AAGACATTAT TGATAAAAAA ACAGGAGAAA GTGAAAAAAA ATTCCTTCCC TATGGAATTC ATACGCATGA AGGTGAAAGG TTCGAAATTC CATTTATAAT GGAATCTACT GGCACGCAAG CATGCTATTA TTTCATTTAT AAATTAATTT CTGCATTACA TTATGGTGGT GTGGCTGTTA TTGATGAACT TGATAGCGAT CTACATCCGT ACATGATTAG GGAGTTAATT GATATGTTCG CTAATAACGG CATTAACAAG TTATCTTCAC AGCTCATCTT TAGTTGCCAT ACCGCAGAGA TTCTAAAATC ATTAAATAAA CATAACGTAT ATTTAGTTGA AAAAAGTAAT AGTGTCAGTG AAGCTTGGCG CTTGGATGAT ATACAAGGTT TGAGGAGTCA AGACAATCTT TACTCTAAAT ATATTACTGG TGCATTAGGC GGCGTGCCAG ATATCAATAT TTAA
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Protein sequence | MIKWYRFKNF YSFKDEQLVD LTLKANSSTS SLDEPWLDTR ITKVLAVMGA NGSGKSNMLK PLAFLSWFCS ESFKSMDNSD YLPIYPHICN KKDPSEIEIY FVDSRTVEDE IHNFEFKYLL KFNKKRVLHE ELKYKTSRLF SSIFYRKYDE LTNSYKVKSA GDDFNISELK TVPQNASAIS YFRRKGDNII ADAMHHIFYS IENNLNAFGK ANFDYGKVLK ATEYYSEEPD IFEKAKKYLT RMDFGLDDII IKSEDIIDKK TGESEKKFLP YGIHTHEGER FEIPFIMEST GTQACYYFIY KLISALHYGG VAVIDELDSD LHPYMIRELI DMFANNGINK LSSQLIFSCH TAEILKSLNK HNVYLVEKSN SVSEAWRLDD IQGLRSQDNL YSKYITGALG GVPDINI
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