| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0084 |
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| Symbol | |
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| ID | 8130984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 109118 |
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| End bp | 110635 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644863354 |
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| Product | peptidase M16 domain protein |
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| Protein accession | YP_003015682 |
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| Protein GI | 253686492 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGGCA CCAAAAAGGC GCTTTTCGTT GGTGGTTTGT TGCTGGCAGT GGTCAGCAGC
AGCGTGCAGG CTGAAGCACT ACAGCCCGAT CCTGCCTGGC AGCAGGGTAA GCTTGATAAT
GGTTTTACCT GGCAGTTATT AACCACGCCA CAGCGCCCCG GCGATCGGGT TGAGTTGCGC
TTGGTGGTGA ATGCCGGGTC ACTGTTGGAA AACGCCCAGC AGGTAGGTTT TGCCCATTTT
CTTCCTCGTC TGGCCTTAGC GCCCGGCGAT AAACTGTCCG CAGCTCAGCG ACCTTCCACG
TGGATGAGCG ATGCTAACGG CTCCCGCGTT CTGCCTCCGG CCATTATTTC GTACGATTTC
ACGTCGTATA ACCTGAGTTT GCCGAATAAT CGCCCCGAGC TGCTGAAAGA AGCGCTGACG
TGGTTGGCTG AAAGCGCAGG GCAGATGACG TTCGACGAAA AAAGCCTGCA GGCGGCGCTG
AAGGTGCCCG ATCAGGTCGC AACCTTTCCG GTTAACCCAC AGGATCCGAG CTGGCGCTAT
CGTCTGAAAG GCTCGCCTCT GCTGGCGCAC GATCCTGCTC AGGACGTCAA ACCACCGTTA
AATGGCGAGC AGCTCCAGCA GTTTTATAAA ACCTGGTATA CGCCAGATGC CATGACGCTC
TACATCGTTG GTCATGTGGA TAACCGCAGC GTGATCGAGC AGATTGGCAA AGTCTTCTCC
CCGCTGGAAG GGAAACGCGA AGCGCCAGCG CCCTTACCGA CGTTAAGTCC GCTGCCGACG
CAGGCGATCA GCCTGATGAA TAACAACGTC CAGAAGGATA CGCTGTCGTT GATGTGGGAT
GCGCCGTGGC ACCCGATTCG TGAATCGCAG GCGTTGGTGC GCTACTGGCT GGGTGATATG
ACGCGGGAGG CGATGTTCTG GCATTTGCAG CAGGTGCTGG AGAAGAGCCC GCAGAAGGGT
AACAACCTCC GCTTCGACTG CAATGTGTTT TATACCCGTT CTCAGTGTGC GATCCATATG
GACGTACCGA ATAGCGAGGG CGTTGAGCCG GGCGTGACGT TTATGGCGCG TGAACTGGCG
ACGCTGCGTG AGAAAGGGCT GACACAGCAA GAGTTTGATG CGCTAATCGC GCGCAAGACG
GACGAGCTGA ACAAGCTGTT TGCCACCTAT GCGCGTACCA GCACGGACAT CTTGATGGAT
CAACGCCTGC GCTCCCAGCA AAACGGTGTC GTCGATATTG CTCCTGAGCA GTACCAGAAA
CTGCGTCAGA GCTATCTGTC CGCGCTGACG CTCGATATGC TGAATCAGGA ACTGCACCAG
CAGCTGGTAC AGGATACAAC GCTGATGCTG ATTCAACAGC CCGGTGAGCC GGAAGCGAAT
ATGAAGGCAT TGCAGGAAGC TTACGATCGG ATTATGACAC CGGCCACCGA GCCTGCGGCC
AGCGCCGCGA CGGCTGCACC TGAAGGCGCC GTTCCAGAAG GAAAAAAACC GCAGGAAACG
GCTCCCGCCG CTCAGTAA
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| Protein sequence | MQGTKKALFV GGLLLAVVSS SVQAEALQPD PAWQQGKLDN GFTWQLLTTP QRPGDRVELR
LVVNAGSLLE NAQQVGFAHF LPRLALAPGD KLSAAQRPST WMSDANGSRV LPPAIISYDF
TSYNLSLPNN RPELLKEALT WLAESAGQMT FDEKSLQAAL KVPDQVATFP VNPQDPSWRY
RLKGSPLLAH DPAQDVKPPL NGEQLQQFYK TWYTPDAMTL YIVGHVDNRS VIEQIGKVFS
PLEGKREAPA PLPTLSPLPT QAISLMNNNV QKDTLSLMWD APWHPIRESQ ALVRYWLGDM
TREAMFWHLQ QVLEKSPQKG NNLRFDCNVF YTRSQCAIHM DVPNSEGVEP GVTFMARELA
TLREKGLTQQ EFDALIARKT DELNKLFATY ARTSTDILMD QRLRSQQNGV VDIAPEQYQK
LRQSYLSALT LDMLNQELHQ QLVQDTTLML IQQPGEPEAN MKALQEAYDR IMTPATEPAA
SAATAAPEGA VPEGKKPQET APAAQ
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