| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0008 |
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| Symbol | |
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| ID | 8130908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 10548 |
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| End bp | 11561 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863279 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003015607 |
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| Protein GI | 253686417 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAACCA TGCTTGATGT AGCGAAAAAA GCCGGTGTCT CCAAAGCCAC CGTATCACGC
GTGCTGACAG GGAATAACTA CGTCAGTAAA ACCACGCGGG ATCGGGTATT CCGGGCGATT
GAAGATATTG GCTACCGGCC CAACCTGCTG GCGCGCCAGC TCGCCACAAG CAAATCGCAA
ATCATTGGCT TGGTCGTGAC CAACACGCTA TACAGCGGCC CCTATTTCAG CGAATTGCTG
TTCCAAACGG CGACGATGAC GGAAAAATAC GGGCGGCAGC TCATCATGGC GGATGGCAAA
CACAGTGCGG AAGAAGAACG GGAAGCGATC CAGTTCCTGC TCGATTTACG CTGCGATGCC
GTCATTATCT ACCCACGCTT TCTTTCTATC GATGCGCTGG AAAGCATTAT CGAACAGCAT
GAACAGCCGA TTATGGTCGT CAACCGCACA CTGCATCGGC ACGGTGACAA CGGTATCTGT
GCTGACCACC AGCAACACTG CCATGATGCC GTCAATTACC TGATTACGCA GGGTCATCGT
GATATCGCGT TTATCTGCGG ATCGCCGAAT TCACCCACCG GTACGAGCCG ACTAGCGGGC
TACCGCCAGG CGCTGGAGGA AAACGGGATT CCCTATAGTG ACAGTCTGGT TGCGCCTGGC
GACTGGACAC ATGACAGCGG TTATTCGGCA GCAAAAACCC TGCTTCAGCG GTCGACCACT
TTCAGTGCAC TGGTCGCCAG CAATGACGAC ATGGCGATTG GCGCGGCAAA AGCGCTGCGC
GAACACGGCC TTGCGATTCC GCAGGATGTC TCGCTGCTGG GGTTCGACGA TTTACCGATG
GCTTCATGGT TCTATCCCCC GCTCACTACC GTGCATGTAC CCGTCGCGGA GATGATCAAC
TATACCCTTG AGAAACTGCT GTGCCGGCTG GAGGGTGAAA CCGTCGAGCC TGCGCCTGAC
TTCAAGGGCG AATTGATTAT CCGAGATTCA GTCAGCAAAG GCCCTGCCAC TTAA
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| Protein sequence | MVTMLDVAKK AGVSKATVSR VLTGNNYVSK TTRDRVFRAI EDIGYRPNLL ARQLATSKSQ
IIGLVVTNTL YSGPYFSELL FQTATMTEKY GRQLIMADGK HSAEEEREAI QFLLDLRCDA
VIIYPRFLSI DALESIIEQH EQPIMVVNRT LHRHGDNGIC ADHQQHCHDA VNYLITQGHR
DIAFICGSPN SPTGTSRLAG YRQALEENGI PYSDSLVAPG DWTHDSGYSA AKTLLQRSTT
FSALVASNDD MAIGAAKALR EHGLAIPQDV SLLGFDDLPM ASWFYPPLTT VHVPVAEMIN
YTLEKLLCRL EGETVEPAPD FKGELIIRDS VSKGPAT
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