| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4264 |
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| Symbol | |
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| ID | 8120189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 4810840 |
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| End bp | 4812471 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644854638 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_003006533 |
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| Protein GI | 251791812 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00254597 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCGC AACGCAATCT CCTTCTCATC GCTCTGCTAT TCGTGACGTT CATGATCTGG
CAGCAGTGGG AAACGGATAA AAATCCACCC GCGGCAACCC AGACCACGCA ACTGGCGAAT
AGCGCTGTGG GCGATGCAGC CAACCAGGGC GTACCTGCCA GCGGTCAGGG TAAACTGATT
ACCGTGAAAA CCGATGTGCT GTCGTTGAAC ATCAACACGC GCGGCGGCGA CATCGAAGAA
GCCGACCTGC TGGCCTACCC GGCGGAGCTG AGCTCCAGCC AGCCGTTCAA GCTGCTGGAA
ACCACCCCGG CCTTCACTTA TCAGGCTCAG AGCGGCCTGA CCGGCAAAAA CGGCCCGGAT
AACCCGGCGA ACGGTTCACG CCCGCTGTAT ACCGCGTCGG CAGATCGCTT TGAACTGCCC
GCTGGTCAGA ATGAATTGCG TATTCCGTTG ACCTACACCG ATGCCAACGG CGTGAGCTTC
ACCAAAACCT TCGTACTGAA ACGTGGTGAA TACGCGCTGA ATGTAGAATA CAGCGTCAAC
AACGCCAGCG CTCAGCCGCT GGAACTGGCC TTGTTTGGTC AGTTGAAACA GTCTATCGAT
CTGCCGTCGC ACCGCGACAC CGGCAGCAAT AACTTTGCCC TGCACACCTA CCGTGGCGCA
GCGTTCTCTT CCAGCGAAGA CAAATATCGC AAATACAGCT TTAGCGATAT GAAAGAGAAC
CTGAATATCA ACACGCAAGG CGGTTGGGTT GCCATGCTGC AGCAGTATTT CGCTACCGCC
TGGGTGCCGA CTGCCGCTGC CAACAACACA TTTTACAGCG CCAATCTTGG CAATGGCTTA
GCCGCCATCG GCTTTAAGGC CGCACCGGTT ATCGTACAGC CGGGTAGCCA GCAAAACCTG
AACGCCACCC TGTGGGTAGG CCCGGAAATT CAGGATAAAA TGGCCGCCGT CGCACCGCAT
CTGGATCTGA CTGTGGATTA CGGCTGGCTG TGGTTCATCT CCCAGCCGTT GTTCAAGCTG
CTGAAGTTCC TGCACGGCTT TATCGGCAAC TGGGGCTTCT CCATCATCGC CATCACCTTT
ATCGTGCGCG GCATCATGTA CCCGCTGACC AAAGCGCAGT ACACCTCGAT GGCGAAAATG
CGTATGCTGC AACCGAAACT GCAGGCGATG CGCGAGCGTA TCGGCGACGA CAAGCAGCGC
ATGAGTCAGG AAATGATGGC GCTGTACAAA GCTGAGAAAG TGAACCCGCT GGGCGGCTGC
TTCCCGCTGA TTATCCAGAT GCCTATCTTC CTGGCGTTGT ACTACATGCT GATGGGTTCG
GTAGAACTGC GCCACGCGCC GTTCGCGCTG TGGATTCATG ACCTGTCGGC GCAAGACCCG
TACTATGTAC TGCCGATCCT GATGGGTCTG ACCATGTTCT TCATTCAGAA GATGTCGCCG
ACTACCGTCA CCGACCCGAT GCAGCAGAAG ATCATGACTT ACATGCCGGT GATCTTCACC
GTGTTCTTCC TGTGGTTCCC GTCAGGTCTG GTGCTGTACT ATATCGTCAG CAACCTGGTG
ACCATCGCCC AGCAGCAGAT GATTTACCGC GGGCTGGAAA AACGCGGGCT GCACAGCCGC
GAGAAGAAAT AA
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| Protein sequence | MDSQRNLLLI ALLFVTFMIW QQWETDKNPP AATQTTQLAN SAVGDAANQG VPASGQGKLI
TVKTDVLSLN INTRGGDIEE ADLLAYPAEL SSSQPFKLLE TTPAFTYQAQ SGLTGKNGPD
NPANGSRPLY TASADRFELP AGQNELRIPL TYTDANGVSF TKTFVLKRGE YALNVEYSVN
NASAQPLELA LFGQLKQSID LPSHRDTGSN NFALHTYRGA AFSSSEDKYR KYSFSDMKEN
LNINTQGGWV AMLQQYFATA WVPTAAANNT FYSANLGNGL AAIGFKAAPV IVQPGSQQNL
NATLWVGPEI QDKMAAVAPH LDLTVDYGWL WFISQPLFKL LKFLHGFIGN WGFSIIAITF
IVRGIMYPLT KAQYTSMAKM RMLQPKLQAM RERIGDDKQR MSQEMMALYK AEKVNPLGGC
FPLIIQMPIF LALYYMLMGS VELRHAPFAL WIHDLSAQDP YYVLPILMGL TMFFIQKMSP
TTVTDPMQQK IMTYMPVIFT VFFLWFPSGL VLYYIVSNLV TIAQQQMIYR GLEKRGLHSR
EKK
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