| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0741 |
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| Symbol | |
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| ID | 8119464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 852670 |
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| End bp | 853137 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644851128 |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_003003100 |
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| Protein GI | 251788379 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.155948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACATA TTGTATATTT GACGTTAGAG GGTGAAAAGC AAGGGTTAAT TTCATCAGGA
TGTTCTACCC TTGATTCGAT CGGAAATAGA TACCAACGTG GGCATGAAGA CCAAATACAA
GTATTGAGCC TAAACCATAC TATAACCAGA GAAGACAATG TAGCGCACCA CCCAGTGCAA
TTGACTAAAC CTATAGATAA ATCATCCCCA TTACTTGGTG TTTCAGTTTC GACGAATGAA
TCGCTTACAG CAACGTTTTA TTTTTATCGA ACCAATCAGG CTGGACAGTT AGAGATCTTT
TATGAGCTTA AACTGACTGG TGCCAGAGTT GTTGCTGTTT CATCAACATA TCCCCACTCA
ATTAATAATA CAGAGTTAAT TCCTTTTGAA GATGTTATGC TAAGATATAA TACTATATCT
TGGTCACATA AAATTGCAGG TACGTCAGGA TATAGTATTT GGGGGTGA
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| Protein sequence | MSHIVYLTLE GEKQGLISSG CSTLDSIGNR YQRGHEDQIQ VLSLNHTITR EDNVAHHPVQ
LTKPIDKSSP LLGVSVSTNE SLTATFYFYR TNQAGQLEIF YELKLTGARV VAVSSTYPHS
INNTELIPFE DVMLRYNTIS WSHKIAGTSG YSIWG
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