| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3917 |
|---|
| Symbol | |
|---|
| ID | 8087302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 4538429 |
|---|
| End bp | 4539769 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644838008 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002989492 |
|---|
| Protein GI | 242241311 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.981496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATTT CCGTTGAATT ATCCCGGCAT CAGGCGCTTC ACGATAAATC TAATATTCGC
CGTGTGGTGA TTTCGAGTTG GATAGGCAAC ACCATCGAGT TTTACGACTT TCTGCTCTAC
GGCCTCGCCA GCGCGCTGGT GTTCGGCAAA CTGTTTTTCC CGACGGTCAG TCCAATGACG
GCGATGCTGG CGTCGTTCGC CACCTTTGGC GTGGGCTTTG TGGCGCGTCC GCTGGGGGGG
ATTTTCTTCG GCCATATGGG GGATACCCTC GGACGTAAAC TGACGCTGTT GATCACCCTT
GGCGGCATGG GGATGGCGAC GTTCCTGATC GGTTGTCTGC CGACCTATCA CCAGATTGGC
GTCTGGGCGC CGATCCTGTT GGTGGTGCTG CGTTTTGTTC AGGGCTTCCT GGTGGGCGGC
GAATGGGGCG GCGCGATGTT GATGGTGGTG GAAAGCGCGC CGGCCAATCG GCGCGGCCTG
CTGGGCTCCA TCCCGCAGAC CGGCGGTTTC TCCGGACAGC TGCTGGCGAC CGCCGTGTTC
GCCGCGGTGT CGGTACTGCC GGAGGATCAG CTGATGTCCT GGGGATGGCG CGTGCCGTTC
ATGCTCAGCG TGGCGCTGGT GCTGGTGGGC CTGTATATGC GCCGCAAGGT GGATGAGACG
CCGGTGTTCC AGCAGGTTCA GCAGCAACAG GCGAAAAGCG CCGAGCCGGA GCGTCGGCAA
AGCCCGGTGG TGGAAGTCTT GCGTAACCAG TGGCGCAGCG TCTGTCTGAT TATGGTGTTG
CGTTTTGCCG AAAGCGTGCC GTTCTTCCTG GCGACCGTGT TTGCCGTTTC CTATGCGACC
GGCCAGCTCG GGGTGCCGAA GCAGACCATG CTGAATGTGA TTATGGCGAC CTGCGTACTG
GCGTTTCCGA TGCATGCGTT GTTCGGGGCG TTGTCTGACC GGGTCGGCCG TCGTCCCATC
TACATCTTTG GCGCGCTGTG CGCCGCCGCG ATGGCGTTCC CGTTCTTCTA TCTGCTGGAA
AGCGGTTCCT TCTGGCTGAT GGTGTTGGGG TATGTGCTGC TGATTAACAT CGCGCACAAC
TCCATCAATT CGGTACAGCC GGCGTTCTTT ACCGAGCTGT TCGGCCCGAA AGTGCGCTAT
AGCGGCGCGT CTATCGGGGC TCAACTGGGC GCTATCGTGG CCGGGGGCTT CACGCCGTTC
ATCGCCAAGG GGCTGACTTC GCTGGATAAC GAATCCTGGA CGCTGGTGGC CACATACGTC
ACCGTCGCTG CGCTGGTGGC CGCCTTCGCC GCCTGGAAAG CGCCGGAAAC CTCGCGGCGC
GATATGACCA AAGACCTGTG A
|
|---|
| Protein sequence | MSISVELSRH QALHDKSNIR RVVISSWIGN TIEFYDFLLY GLASALVFGK LFFPTVSPMT
AMLASFATFG VGFVARPLGG IFFGHMGDTL GRKLTLLITL GGMGMATFLI GCLPTYHQIG
VWAPILLVVL RFVQGFLVGG EWGGAMLMVV ESAPANRRGL LGSIPQTGGF SGQLLATAVF
AAVSVLPEDQ LMSWGWRVPF MLSVALVLVG LYMRRKVDET PVFQQVQQQQ AKSAEPERRQ
SPVVEVLRNQ WRSVCLIMVL RFAESVPFFL ATVFAVSYAT GQLGVPKQTM LNVIMATCVL
AFPMHALFGA LSDRVGRRPI YIFGALCAAA MAFPFFYLLE SGSFWLMVLG YVLLINIAHN
SINSVQPAFF TELFGPKVRY SGASIGAQLG AIVAGGFTPF IAKGLTSLDN ESWTLVATYV
TVAALVAAFA AWKAPETSRR DMTKDL
|
|---|
| |