Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0273 |
Symbol | |
ID | 8088508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 308909 |
End bp | 310486 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644834341 |
Product | nickel ABC transporter, periplasmic nickel-binding protein |
Protein accession | YP_002985912 |
Protein GI | 242237731 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTGA CCCGCTGGTT ATTGGTGTTG CTGTTGGCGG CGTTGGCGTT GTACGGCGTC AGCGCGCTGG CGACGCCGAC GGACAATATA CTGAATTACG CCAGTACCAA GGATATCCGC GATATCAATC CCCACCTGTA CGGCGGCGAA ATGGCGGCGC AGAACATGGT GTTCGAGCCG CTGGTGATCA ATACCGATCA GGGGGTGAAA CCCTGGCTGG CGCAGCGTTG GGATATCTCG CCCGACGGCC TGCACTACCG TTTTTATCTG CGTCCGGGGG TGACGTTCAG CGACGGCGAG CCGTTCAACG CGCAGGCGGT TAAGCTCAAC ATCGACGCGG TGCTGGCCAA TTTGCCGCGC CACGCCTGGC TGGAACTGGC GCGACAGATC GACCAGGTCA GCGTGGTGGA CGCATTGACG CTGGATATCA CGCTGAAAAA TCCCTACTAC CCGACGCTGA TTGAGTTGGG GTTGACGCGG CCGTTCCGTT TCCTCTCGCC GCGCTGCTTT AATCACGGTC AGACCAAAGA CGGCGTGCGC TGTTATGCAG GCACCGGCCC CTGGCTGTTG GCGCAGCATG TGACACAGCA ATACGCCCGT TTTGACGCCA ACCCGCATTA CTGGGGGGCG AAGCCGGCGC TGGCCGGCGT GGAGTGGCGG GTGATCCCGG ATGGACAAAG CCTGTTGCTG GCGCTGCGTA AAGGCGATAT CCAGCTGATT TTCGGCGCCG ACGGCGACAT GTTGGACGGC GATAACTTTG CCGCATTGCA GGCTTCCGGC CAGTTTCGCA CCGCCATCAG TGAACCGGTA GCATCGCGGG CGTTGGTGCT GAACAGCAGT CGTCCGATTG TTGCGGATCA ACGCCTGCGC CAGGCATTGC AATACGCGGT AGATAAAGAA GCCATCGCCC AGGGCGTGAT GGCGGGCGGC GAAAGCGTGG CGCAGACGCT GCTGGCGCGT TCGGTGCCTT ACGCCGATAT CCCTGACTTG CCGGTTTACG CTTATGATCC GGCACGAGCG GCGGCGTTGC TCGATGAGGC GGGGTGGCGT CGCGAGGGCA ACGGCATTCG CAGTAAACAG GGGATGCCGC TGCGGCTGGT GTTTTCCTAC AACAGCAACA ATGCCAACGA ACGGGCGATC GCCGAAGTGA TCCAGAGCCA GTTCCGGCAG GTCGGCGTCG AGCTGGTGCT GCTGGGCGAG GAGAAACAGG CGTATCTGGA TCGGCAAAAA TCCGGCGATT TCGACCTGCA GTATTCGCTG TCGTGGGGCA AACCCTATGA CCCGCAATCC TACGTTTCAT CATTCCGCAT TCCGGCGCAC GCCGATTATC AGGGGCAGAA AGGGTTGCCG GATAAAGCGG AGATCGACCG TATGATCGGC GACGTATTGA TTGCTCACGA TGAGAACGCG CGGCGGGCAC TGTATCGCCA GATCCTGACC CGGCTGGCGC AGGAGGCGGT ATATATTCCG CTCACCTATT CCCGTACCCG GGCGGTGTTC AACCAGACGC TGCAAGGCGT TGCCTTTAAT CCGTCGCAGT ATGAAATTCC GTTCGAAAAC ATGTCGTTCC AGCGATAA
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Protein sequence | MTLTRWLLVL LLAALALYGV SALATPTDNI LNYASTKDIR DINPHLYGGE MAAQNMVFEP LVINTDQGVK PWLAQRWDIS PDGLHYRFYL RPGVTFSDGE PFNAQAVKLN IDAVLANLPR HAWLELARQI DQVSVVDALT LDITLKNPYY PTLIELGLTR PFRFLSPRCF NHGQTKDGVR CYAGTGPWLL AQHVTQQYAR FDANPHYWGA KPALAGVEWR VIPDGQSLLL ALRKGDIQLI FGADGDMLDG DNFAALQASG QFRTAISEPV ASRALVLNSS RPIVADQRLR QALQYAVDKE AIAQGVMAGG ESVAQTLLAR SVPYADIPDL PVYAYDPARA AALLDEAGWR REGNGIRSKQ GMPLRLVFSY NSNNANERAI AEVIQSQFRQ VGVELVLLGE EKQAYLDRQK SGDFDLQYSL SWGKPYDPQS YVSSFRIPAH ADYQGQKGLP DKAEIDRMIG DVLIAHDENA RRALYRQILT RLAQEAVYIP LTYSRTRAVF NQTLQGVAFN PSQYEIPFEN MSFQR
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