Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3603 |
Symbol | |
ID | 8021290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 156843 |
End bp | 159059 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644832394 |
Product | Peptidase M1 membrane alanine aminopeptidase |
Protein accession | YP_002983535 |
Protein GI | 241665176 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.604033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGATT CGACAACCCA CCGTCGTACG GCCACGACAC GCGCCACAAA CCTCCGCTCG CGCCGGGGGT TCAAGCTGGC ACTCGTCGCG CAGGCTGCCG CCGCAATGAT TCTGGCCGCA TGCGGCGGCG GCGGCGATGA AGCGCTCACA CCGGCTGGCG GCAAGGTCGA TGCCAACGGC TCGCAGCAGC AGGGCAATAC CAATGCGCAG GCGCCGGCCG TCGATGCATC GGTGCCCCCG GTTGAACTGC CGGACACCAT CAAGCCCGTC AACTACAAGC TGTGGTTCCG CCCGAGCGCA GACCTGAACA GCTTCTCGGG CCGCGCCGAC GTGGAGATCA AGGTCACCAA GCAGACCGGC GCGGTGACGC TGGCCGTGCG TGACCTGAAG CTCGACGCCT CACGCCTGAC GCTCACGCCC ACCTCGGGCG GCGGTGCATC GCGCGTGCTG GTGCCGATTC CGCAATCGCA AGGGGCCTTC TACGACCTGC GCGACCCGAC CGGAGACATC AAGCCCGGCA ACTACGTGCT GCACATGGAA TGGACGGGCA CGATCAACTT CACCAAGGCC GAAGGCATCT TCAAGCTGGG CCTGCAGGCG GCAACGGGCG AGAGTTCCGA CGCCATCGTC ACGCAGGGCG AATCGAACTT CGCGCGCGAG TGGTTCCCGA GCTGGGATGA GCCGGCCTTC CGCAACACCT TCGAGGTGAC GGCGGAAATT CCGGGCGACT GGAAGGCCGT GGCCAACGGC AGGCAGACGG GTGCCACCAA GCTGCCGGAC GGCTATCAGC AGGTGTCGTT TGCCAAGACC CCGTCGATGC CGGCGTACCT GCTGTTCTTC GGCGGCGGCA AGTTCGACAT CCTGGAAGAC CAGTTCACCA ACCCGCTCGA TGGCAGCAGC ATGCGCCTGC GCTGGTGGGT GCCGCCTGGC GAGGCGCACT CGGCGGTGGC CGGCATGCAG TTCACGAAGG AAGCGCTGAA CCACTACTAC AACTACTTCC AGATCCCGCT GCCGTTCGAC AAGATGGACA CCATCGTCGC CAACGACAGC TACGACAACA AGAATGCAGG CTTTGGCGGG ATGGAGAACT GGGGCGCCAT CTTCGAATTT GCCGACCAGG TGCTGGTGCC GCCCGATGGC GCGCCGACGA CCGTCCACTC GATGGGCAAG GCCCGCTCGT TCGTTGTGGT GTCGCATGAA CTGGCGCACC AATGGTTTGG CGACCTCGTC ACGCTGGACT GGTGGGACGA CATCTGGTTG AACGAATCCT TTGCCAACTG GTTCGAGAAC GTCACCAAGA TCGCACTGCA CCCGGAGTTC CAGGGCAACA CGTGGGCCGA CTATGCGGCC GTCAAGCAGC GCGTCTACAC GCTCGACCTG CAGCCGACCT CGGTACCGGT GCAGCACAAC TTGAGTGATG CCGGCTCGAT GGACTTCCTC GACCGCTTTG CCTACAACAA GGGCGGCCAT GTCCTGCAGA TGATCGAAAA CTATGTCGGC AAGGACGCCA TGCGCAAGGG GCTGCAGAGC TACCTGAACA AGTACAAGTT CGGCAACGGC ACACCGCCGC GCCTGTGGGC AGAGCTGGAA GCCGCCAGCG GCAAGCCTGT CGGCAAGGTG GGCGACAGCT TTGTGCGCCA GACGGGCGTG CCGCTCGTCA GCATCGACGC GCAGTGCAAC CCGGCCACCA ACCAGAACGT ACTGACGATC ACGCAGAAGG CGTTCCCGAA CAAGAACGTC TATTCCGGCT ATCAGTGGAA TATTCCGCTC ACGATCGCCT ACGGCGATGG GCTGGCGCAG ACGCAGACGG TGGTGCTGGA TCAGCAGACC GCACAGGTCA CGCTGCCGAC CTGCTCGGCC GTGCTGGCGA ACCCCACCGG CCTGGACTAC TACGTGACCA ACTACAGCCC GACGCTGTGG AGCGCGCTGC TGGCGCAGGC CGGCACCATC ACCAACAAGG CGACGACGAC CAACATCGCC GGCGATGCAA CGCAGCTGTA CAACGCGCAG ATCATCGACA AGGCGCTGTA TGACCAGATC GTCGGCATCC AGAACATGCA GCCGGCCGTC GCAACGCTGC GTGCACAGGC TGTGACGCCG ACGGGCTCGC TGCGTCCGCA AGCGGTGCAG CTGCAACAGA TGCAGAACAT GGATCGCCCG ATCCACAAGT TCCGCTACGA AGGTCTCATG AAGCATCTGA CCGACATCAA GCGGTAA
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Protein sequence | MRDSTTHRRT ATTRATNLRS RRGFKLALVA QAAAAMILAA CGGGGDEALT PAGGKVDANG SQQQGNTNAQ APAVDASVPP VELPDTIKPV NYKLWFRPSA DLNSFSGRAD VEIKVTKQTG AVTLAVRDLK LDASRLTLTP TSGGGASRVL VPIPQSQGAF YDLRDPTGDI KPGNYVLHME WTGTINFTKA EGIFKLGLQA ATGESSDAIV TQGESNFARE WFPSWDEPAF RNTFEVTAEI PGDWKAVANG RQTGATKLPD GYQQVSFAKT PSMPAYLLFF GGGKFDILED QFTNPLDGSS MRLRWWVPPG EAHSAVAGMQ FTKEALNHYY NYFQIPLPFD KMDTIVANDS YDNKNAGFGG MENWGAIFEF ADQVLVPPDG APTTVHSMGK ARSFVVVSHE LAHQWFGDLV TLDWWDDIWL NESFANWFEN VTKIALHPEF QGNTWADYAA VKQRVYTLDL QPTSVPVQHN LSDAGSMDFL DRFAYNKGGH VLQMIENYVG KDAMRKGLQS YLNKYKFGNG TPPRLWAELE AASGKPVGKV GDSFVRQTGV PLVSIDAQCN PATNQNVLTI TQKAFPNKNV YSGYQWNIPL TIAYGDGLAQ TQTVVLDQQT AQVTLPTCSA VLANPTGLDY YVTNYSPTLW SALLAQAGTI TNKATTTNIA GDATQLYNAQ IIDKALYDQI VGIQNMQPAV ATLRAQAVTP TGSLRPQAVQ LQQMQNMDRP IHKFRYEGLM KHLTDIKR
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