Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3458 |
Symbol | |
ID | 8021143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3644984 |
End bp | 3646648 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644832251 |
Product | putative inner membrane protein translocase component YidC |
Protein accession | YP_002983393 |
Protein GI | 241665033 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCA AACGCACCAT TCTCTGGGTG ATCTTCTCGC TGGCGGTTGT CCTGCTGTTC GACAACTGGC AACGCGCGAA TGGCCACCAG TCGATGTTCT TCCCGACACC GCAAACGGCC ACCACGACGG CCGCTGCGCC GGGCAGCACG CCCGCAGGCG ACGTGCCGAA GAGCGCCTCG GCGACAGCAG CCGCCGGGTC GCAAGCCGCC CCGGCCACGG GCGCCGCTTC GCAGGCACCG GCTTCGGAAA AGATCGTCAT CTCGACCGAC CTGCTGCGCG CCACCATCGA TACCGACGGC GCCATCGTCA CCAAGCTCGA ACTGCTTGAC CAGAAGGACC ACGACGGCAA CCCGATGGTG CTGTTCGACC GCAGCGTCGA GCGTACCTAT CTGGCGCGCT CGGGCCTCAT CGGCGGCGAT TTCCCGAACC ACACGACGGT GTTCACGGCA TCTGCCGGCC CGCGTGACCT GGGCACGGGC AACGATGTCT CGATCACGCT GACGGCCGAC AAGGGCGGCG CCAAGCTGGC CAAGACGTAC GTCTTCAAGC GCGGCAGCTA CGTGATCGAC ACGCGCTTCG ACGTGACCAA CGACGGCACT GCGCCGATCA ACCCGACGCT ATATATGGAA CTGGCCCGCG ATGGCGGCGC TGTGGAGCAA TCGCGCTTCT ACAGCACGTT CACCGGCCCG GCCGTATACA CCGACGGCGA CAAGTTCCAC AAGATCACCT TTGCCGACAT CGACAAGGGC AAGGCACAGG TGCCAGCCCC GACCGACAGC GGCTGGGTGG CGATGGTGCA GCACTACTTT GCATCGGCTT GGATTCCGGC AGACAACGTC AAGCGCGAGT ACTACGTCAA CCGCGTCGAT ACCAACTTCT ACCGCATCGG CATCCAGGAG CCGCTGGGCA CCGTGGCGCC GGGCGCCAGT GTGTCGGCCA CGGCACGTCT GTTCGCCGGC CCGCAGCAAG CGCGCATGCT TGAGTCCATC ACGCCGGGCC TGGACCTGGT GAAGGACTAT GGCTGGCTGA CCATCGTCGC CAAGCCGCTG TTCTGGCTGC TGGAAAAGAT TCACGCACTG CTGGGCAACT GGGGCTGGTC GATCGTTGCA CTCACCGTGC TGATCAAGCT GGTGTTCTTC CCGCTGTCGG CCACGAGCTA CCGCTCGATG GCCAAGATGA AGGACCTGCA GCCGCGCATG ACGGCCATCC GCGAGCGCCA CAAGGGCGAT CCGCAGAAGA TGAACCAGGA AATGATGACG CTGTACCGCA CCGAGAAGGT CAATCCGCTC GGCGGCTGCC TGCCGATCGT GATCCAGATT CCGGTGTTCA TGGCGTTGTA CTGGGCGCTG CTGTCGTCGG TCGAAATGCG CGGTGCGCCC TGGATCGGCT GGGTGCACGA CCTGTCCACG CCCGACCCGT TCTACATCCT GCCGGTGCTG ATGGCCGTGT CGATGTTCGT GCAGACCAAG CTGAACCCGA CCCCGCCGGA CCCGGTGCAG GCCAAGGTGA TGATGTTCAT GCCGATCGCG TTCTCGGTGA TGTTCTTCTT CTTCCCGGCC GGCCTGGTGC TGTACTGGGT GGTGAACAAC TGCCTGTCGA TCGCGCAGCA ATGGTCGATC AACCGCATGC TGGGCACCAA CAACAAGGCG GCACCCGCCA AGTAA
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Protein sequence | MDIKRTILWV IFSLAVVLLF DNWQRANGHQ SMFFPTPQTA TTTAAAPGST PAGDVPKSAS ATAAAGSQAA PATGAASQAP ASEKIVISTD LLRATIDTDG AIVTKLELLD QKDHDGNPMV LFDRSVERTY LARSGLIGGD FPNHTTVFTA SAGPRDLGTG NDVSITLTAD KGGAKLAKTY VFKRGSYVID TRFDVTNDGT APINPTLYME LARDGGAVEQ SRFYSTFTGP AVYTDGDKFH KITFADIDKG KAQVPAPTDS GWVAMVQHYF ASAWIPADNV KREYYVNRVD TNFYRIGIQE PLGTVAPGAS VSATARLFAG PQQARMLESI TPGLDLVKDY GWLTIVAKPL FWLLEKIHAL LGNWGWSIVA LTVLIKLVFF PLSATSYRSM AKMKDLQPRM TAIRERHKGD PQKMNQEMMT LYRTEKVNPL GGCLPIVIQI PVFMALYWAL LSSVEMRGAP WIGWVHDLST PDPFYILPVL MAVSMFVQTK LNPTPPDPVQ AKVMMFMPIA FSVMFFFFPA GLVLYWVVNN CLSIAQQWSI NRMLGTNNKA APAK
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