Gene Rpic12D_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3082 
Symbol 
ID8020765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3258194 
End bp3258511 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content62% 
IMG OID644831878 
Productchaperonin Cpn10 
Protein accessionYP_002983022 
Protein GI241664662 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTC GTCCCCTCTA CGACCGGGTT ATCGTCAAGC GAATCGAACA GCAACGGACG 
ACGGCCTCGG GCATCGTGAT TCCTGATTCC GCCGCAGAAA AGCCCGAGCA GGGTGAAGTC
ATCGCGGTCG GCACGGGCCG CCTGCTTCAG GACGGCACGC AGCGCGAACT CCAATTGAAG
GTCGGTGACC AGGTGCTGTT CGGCAAGTAC GCCGGGCAGA CCGTCAAGGT CGATGGCGAG
GAACTCCTCG TCATGCGTGA AGAAGACGTC ATGGGCGTCA TCGAAACCCA CGCCGAGGCG
GTTGCCAAGG CCGCCTGA
 
Protein sequence
MKIRPLYDRV IVKRIEQQRT TASGIVIPDS AAEKPEQGEV IAVGTGRLLQ DGTQRELQLK 
VGDQVLFGKY AGQTVKVDGE ELLVMREEDV MGVIETHAEA VAKAA