| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2863 |
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| Symbol | |
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| ID | 8020535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3019932 |
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| End bp | 3021056 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644831650 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002982805 |
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| Protein GI | 241664445 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.180964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGA AACTGTTTGC AGCTGCTGTC GCAGCTCTGG CCGCCGGTGG CGCCTATGCA
CAATCCTCCG TGACCCTGTA CGGCGTGGTC GACGCTGGTC TGACCTACGC AAACAAGGTG
CCGAACGGCA ACGGCGGCGG TAGCTCGCGC GTTGGCCTGG ATTCGGGCGG CCTGTCGGGC
TCGCGTTGGG GCCTTCGTGG TGTTGAAGAC CTGGGCGGTG GTCTGAAGGG TATCTTCAAC
CTGGAAAGCG GCTTCACCAT CGACGACGGC AAGTCGGCCC AAGGTGGCCG CCTGTTCGGT
CGTAACGCTT ACGTTGGTCT GCAAGGCCAG TGGGGTCAAC TGACCCTGGG TCGTCAGCAG
AACCTGCTGT ACGACTTCTC GCTGATCTAT GACCCGATGG CGATCGCTTC GCGCTACGGT
CTGGCTAACC AAGACGCGTT CTTCTCTGGC CGCGCTGACA ACGCCGTCAA GTACATCGGC
ACGTTCGGTG GCCTGAGCGT CTCGGCTCTG TACTCGTTCA ACCGCGATGG CAACGAGCAA
CCTGGTCTGC CTAAGCTGGG CCGTGAGTGG AGCCTGGGTG CCAACTACGC TGGTGGCCCG
TTCTCGGTTG GTGCTGTGTA CGACCAATCC AACCAGACGA CCATTGCTAC GGCAGACAAC
AAGGAACAAC GCGCCACGAT CGCTGGCACG TACGCCTTTG GTCCGGCCAA GCTGTACGCT
GGCTACCGTT GGTACCATGC CAACTTCGCA ACCGTTGCTG GCAACGGCAA CCTGCGCTCG
AACCTGTACT GGCTGGGCGC TGGCTACCAA GCTACGCCGG CTCTGACGCT GACGGGTACG
GCTTACTACC AACAGTTCAA GAACAGCAAC GCGGGTAACC CGTGGTTGTT CGTGGTCGGC
ACCGACTACG CTCTGTCGAA GCGCACCGAC GCGTACTTCA ACCTGGCCTA TGCTAAGAAC
AGCAGCGGTT CGGGCCTGGG CGTGCTCAAC CTGAACAAGA CCGATTCGTA CGCCGGTACG
ACGCTGGGTA GCACCAACTT CGGCAACCAG AACGTGTACT CGAGCCCGGC TGCTGGCAAC
GCCAACCAGT TCGGCGCTAC CGTTGGTATC CGCCACAAGT TCTAA
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| Protein sequence | MKMKLFAAAV AALAAGGAYA QSSVTLYGVV DAGLTYANKV PNGNGGGSSR VGLDSGGLSG
SRWGLRGVED LGGGLKGIFN LESGFTIDDG KSAQGGRLFG RNAYVGLQGQ WGQLTLGRQQ
NLLYDFSLIY DPMAIASRYG LANQDAFFSG RADNAVKYIG TFGGLSVSAL YSFNRDGNEQ
PGLPKLGREW SLGANYAGGP FSVGAVYDQS NQTTIATADN KEQRATIAGT YAFGPAKLYA
GYRWYHANFA TVAGNGNLRS NLYWLGAGYQ ATPALTLTGT AYYQQFKNSN AGNPWLFVVG
TDYALSKRTD AYFNLAYAKN SSGSGLGVLN LNKTDSYAGT TLGSTNFGNQ NVYSSPAAGN
ANQFGATVGI RHKF
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