Gene Rpic12D_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2588 
Symbol 
ID8020252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2725792 
End bp2726805 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID644831368 
Product2-dehydro-3-deoxygalactonokinase protein 
Protein accessionYP_002982531 
Protein GI241664171 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3734] 2-keto-3-deoxy-galactonokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC TCACCATCGA TACCGGTACC ACCAACACAC GCGTCACGGT CTGGCGCGAT 
GACGTTGCGC TCTGCCAGGC TGCGCGCCAG GTTGGCGTGC GCGATACCGC CATCACGGGC
AACCGGACGA CGCTGCAGCG CGGCGTGCAG GACACCATTG ACGCTGCACT GCAGAAGGCC
GGGTTCGGCA TGGGCCAGGT CGACCTGGTG CTGGCGTCCG GCATGATCAC CTCCAACGTC
GGCCTGCATG AGGTCCCGCA CCTGATGGCG CCGGCCGGCC TGCGCGACCT GGCTGCCGGG
ATGGTGCAGG CGAGCATCCC CGAGGTGTGC GCCCAGCCGA TCTGGTTTGT GCCGGGCGTG
CGCAATCCGG TGGACAACCT CGGCCTGCAC AACATCGAGT CGATGGACAT GATGCGCGGC
GAAGAGGTCG AGACCATGGG TTTGGTCTCG CGCCTTGGCA TCACGGAGCC GGCGGTGATC
GTGCTGCCCG GGTCGCACTC GAAGTTCGTG CATCTGGACG CCGACCAGCG CATCACCGGC
TGTGTGACCA CGCTGGCCGG CGAGCTGCTC CACGTGATCA CGCACAACAC CATCCTGGCC
GACGCGCTCG ACTCGGACTT TGCCACCGAG GTCGATCCGG AAATGTTGCT GTCCGGCGCG
CGCAGCGCCA GCAGCATCGG GCTGGGGCGC GCCTGCTTCA TGGTGCGCAC GCTGGGCCAG
TTCACGATCT ACGAGCGCAA TGCGCGGGCC AACTTCCTGC TGGGCGCGGT GCTGGGCGCG
GATCTGCTCA CGCTGAAAAA CAGCAGCGCG ATCCGCATGA ATCCGGGCAC GCAGTTCGTC
ATCACGGGCA AGCCGCTGCT GCGCGAAGCG CTGGCCGTGC TGGTGTCGGA CGACGATTTC
TTCTCGGGCA AGGTCACCGT CACCAGCAGT GAACAGCAGG AGCACCTGGC CGGCAGCGGC
GCGATCGCCA TCGCACGCGA GCGCGGCCTG GTCAAAACCT TAAAGGTGGC GTGA
 
Protein sequence
MNILTIDTGT TNTRVTVWRD DVALCQAARQ VGVRDTAITG NRTTLQRGVQ DTIDAALQKA 
GFGMGQVDLV LASGMITSNV GLHEVPHLMA PAGLRDLAAG MVQASIPEVC AQPIWFVPGV
RNPVDNLGLH NIESMDMMRG EEVETMGLVS RLGITEPAVI VLPGSHSKFV HLDADQRITG
CVTTLAGELL HVITHNTILA DALDSDFATE VDPEMLLSGA RSASSIGLGR ACFMVRTLGQ
FTIYERNARA NFLLGAVLGA DLLTLKNSSA IRMNPGTQFV ITGKPLLREA LAVLVSDDDF
FSGKVTVTSS EQQEHLAGSG AIAIARERGL VKTLKVA