Gene Rpic12D_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2283 
Symbol 
ID8019947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2413882 
End bp2414760 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content57% 
IMG OID644831066 
Productputative phage repressor 
Protein accessionYP_002982229 
Protein GI241663869 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00298807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.71179e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCAGCCC AGCCCCTAAC CCCAGAACAG AAGGCCGATG CCGAGCGCTT GCATGCGCGC 
TTCAAGGCAT GGCAACAGGA TCAGAAAGAT CGGAAGCTTC CGTCTTCACA AGCGGAGGCG
GCTTCACGGC TTGAGTTTGG CCAGAGCGCT CTAAGCCAGT ACCTGCAAGG CCGCATCCCC
CTCAACGTGA AGACCCTCGC CAAGTTTTGC TCATTGCTCG GTTGTGAACC GGCAGACATC
AGTCCTTCGC TTGCCGCCGA GATGAAGGTC ATCTCTAAGC CGCTGCAACT CAAACAACTC
AATACACCAG AGGGCACAGA GGAATTGGCG AAGGAGCAGA TGCGCGCAGC CATTCATAAG
CTGGACGAAT CCGAGTTGCG CGCCATAGCG GAGAGCAAAG GCTTCCCTGC CCGGCCAATT
GCGGTCTACA ACACCTTGGA AGAACTGCCA CCCGAGACAA CTGTGTTGAT CACCCATGTG
GACGTGGCTC TCTCGGCTGG AAATGGACGC GAGACTTGGC ACATCGAAGA AAAAGAGCCT
CTGCCCTTTC AAGCCGACTA CATTCGACGC CTTGATGCAA GCCCAAAGAA TCTGGTGGCG
GTAAAAGTGC GCGGAGACAG CATGGAGCCA CGCCTGTTCG ACGATGACAC GGTGGTAGTG
GACAGGGCTG ATCGGCGTAT TCCCGCTAGC GGGGGAGTGT TTGCCATCGT CTATGCCGGG
GAGATGCTGG TGAAGCGCCT GTTCAAGCTG CCTGACGGCT CGATAGACAT CGTCAGCGAC
AATCCGAAGT ACAAGTCGCT GGTTGTTCAA CCTGACCAAC TCGAGCACAT AGACATCGTC
GGCAGGGTGA AATACCGGTC CGGAATGGGG GACTTCTAA
 
Protein sequence
MPAQPLTPEQ KADAERLHAR FKAWQQDQKD RKLPSSQAEA ASRLEFGQSA LSQYLQGRIP 
LNVKTLAKFC SLLGCEPADI SPSLAAEMKV ISKPLQLKQL NTPEGTEELA KEQMRAAIHK
LDESELRAIA ESKGFPARPI AVYNTLEELP PETTVLITHV DVALSAGNGR ETWHIEEKEP
LPFQADYIRR LDASPKNLVA VKVRGDSMEP RLFDDDTVVV DRADRRIPAS GGVFAIVYAG
EMLVKRLFKL PDGSIDIVSD NPKYKSLVVQ PDQLEHIDIV GRVKYRSGMG DF