Gene Rpic12D_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2212 
Symbol 
ID8019875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2358292 
End bp2358828 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content62% 
IMG OID644830994 
Productprotein of unknown function DUF55 
Protein accessionYP_002982158 
Protein GI241663798 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.84327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGCTAT GCTGCGCACA CCGTCACTTT TCCGCTTCTG CGCACCTCGC GCGCGAACCC 
CGCACGATGG CCACCCAATA CTGGTTGATG AAGTCCGAGC CCGATGAGGC CAGCATCGAC
ACGCTGCACG ACAAGGGCAC CCTGCCCTGG ACCGGCGTAC GCAATTATCA GGCGCGCAAC
TTCATGCGCG ACCGCATGCG CATCGGCGAC GGAGTGCTGT TCTACCACTC GTCCTGCCCG
CAGCCGGGCA TCGCTGGGCT GGCGGAAGTC TGCTCGACCA GCTATCCAGA CCCCACCCAA
TTCGACGCCA AAAGTCATTA CCACGATCCA GCATCGAAGC CGGAAGCGCC GCGCTGGATG
CTCGTCGACG TGAAGTTCGT GCGCAAGTGC GCGCTGATCG ATCTGCCGAC GTTGCGTGCC
CACGAACAAC TCGCCGACAT GACGGTGTTG CAACGCGGCA ACCGACTGTC GATCACGCCG
GTCACCGCGG CGCAGTGGCG TTACATCACA ACGAAATTGA TGCGCGATCC TGAGTGA
 
Protein sequence
MLLCCAHRHF SASAHLAREP RTMATQYWLM KSEPDEASID TLHDKGTLPW TGVRNYQARN 
FMRDRMRIGD GVLFYHSSCP QPGIAGLAEV CSTSYPDPTQ FDAKSHYHDP ASKPEAPRWM
LVDVKFVRKC ALIDLPTLRA HEQLADMTVL QRGNRLSITP VTAAQWRYIT TKLMRDPE