| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0853 |
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| Symbol | |
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| ID | 8018484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 893990 |
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| End bp | 895264 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644829632 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_002980826 |
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| Protein GI | 241662466 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.585626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTG ATCTCTGGTG GCTGTTGGCC ATCCCGCTGG TGTTTGGCTT GGGCTGGGCG
GCTGCCCGAC TCGATGCCCG CCAGTTGCGC ACCGAACAAT CGTCGCTGCC GCGCTCGTAT
TTCAAGGGTC TGAATTTCCT GCTCAACGAG CAGCCGGACA AGGCCATCGA CGCTTTCATT
GAAGTTGCTC GGCTGGACCC AGAGACCACC GAGCTGCACT TTGCGCTCGG CAGCCTGTTT
CGTCGGCGCG GCGAAACTGA ACGCGCCATT CGCGTTCACC AAAATCTCGT CAATCGCCCC
GATCTGCCCC CCAATGAGCG CGATCACGCT TTGTTTGAAC TGGGGCAGGA CTTTCTACGC
GCGGGCTTGC TGGATCGCGC CGAGGAATCC CTGCGCATGC TGATGGAAGG CGCATTTGCT
GAGCCGGCCA AGCGCGTGCT GCTGGAGTTG TATGAAGTCG AGAAAGAGTG GCGCAAAGCC
ATTGAGGCCG CGCGTGAATT GCAGAAGCTG CAGGGCAAGG ATTACGTCGT GCAGATCGCG
CAGTTCTGCT GCGAGATCGC GCAGGAAGCG CTGCAGCGCA AGGATGTGCC GAGCGCCATC
GAATGGCTGG AACGTGCCCT TCAGGAGAAT CCCAAGAATG TGCGCGCCAC CATTCAGTTG
GGCGATGTGG CGCAAGGGCA GGGCGATGTT GAAGGCGCCA TCAAGCGTTG GCGTAGCATC
GAACAGCAAA ACACTGCGTT CTTGCCCTTG GTGGCTGAAC GGCTGATGAA GGCGTACACG
CAGCTTGGTC GTGCCGCAGA GGGGCTCGCC TGGTTGCGCT CCAAGATGGA CGCACGGCTG
GGCCCCGAAC TGCTCGATAC GGTCTACAAA TACGAACTGG ACGTGCACGG TATCGACGAT
GCCGTGGCGC TGATGCGCGA CCAGATTCGC CGTCAGCCCT CGTTGATGGC GTTGACGCGG
CTGGTGGAAG CCGAGGCGAC GCGCGCGTCC GAGGCGGTCG GCCATGAAGC ACCTGCGACG
GCCGACGTAG CCGAGAGTGC GTTGACGGAT CCGGTTGAGG CGGGCAGCAA TGCTGACATC
CAGCGCGCGC AGGATCTCGG CGCCATTCGG GATTTGCTGC AAAGTCGAAC GCGCAACCTG
GCGCGCTACA CCTGCCAGGA GTGCGGTTTC CGCGCGCGTC TGTTTTATTG GCAATGCCCC
GGCTGCAACC GCTGGGAGAC GTATGCCCCG CGCCGTACCG AAACGCTCGG CGGCAGCGGT
GGCGCCAGCA TGTAA
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| Protein sequence | MDFDLWWLLA IPLVFGLGWA AARLDARQLR TEQSSLPRSY FKGLNFLLNE QPDKAIDAFI
EVARLDPETT ELHFALGSLF RRRGETERAI RVHQNLVNRP DLPPNERDHA LFELGQDFLR
AGLLDRAEES LRMLMEGAFA EPAKRVLLEL YEVEKEWRKA IEAARELQKL QGKDYVVQIA
QFCCEIAQEA LQRKDVPSAI EWLERALQEN PKNVRATIQL GDVAQGQGDV EGAIKRWRSI
EQQNTAFLPL VAERLMKAYT QLGRAAEGLA WLRSKMDARL GPELLDTVYK YELDVHGIDD
AVALMRDQIR RQPSLMALTR LVEAEATRAS EAVGHEAPAT ADVAESALTD PVEAGSNADI
QRAQDLGAIR DLLQSRTRNL ARYTCQECGF RARLFYWQCP GCNRWETYAP RRTETLGGSG
GASM
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