| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0052 |
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| Symbol | |
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| ID | 8017675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 56464 |
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| End bp | 57438 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644828836 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002980036 |
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| Protein GI | 241661676 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCAAG CGTTGTGCAT GGGTAGGGCA GGGTGTTGGG CGGCGGCATC GGCCGCAGCA
ATCGTGCTGG CGGGCTGCGC TAAACACGAC GACCGCACCT ACCAGGGCTA CGTGGAAGGT
GAGTTTGTCT ATGTGGCGTC GCCGGTGGGC GGGCGGCTGG ACCATCTCGG CGTGCAGCGC
GGGCAGACGG TCAACGCAGG TGCGCCGCTC TTCGTGCTGG AATCGGTGGA TGAGACTGCC
GCTCGCCAGC AGGCTGCCGC GCAATTGCAA GGCGCCGAAG CGCAACTCGC CGACCTGAAC
GTCGGCAAGC GTGTGCCGGA AGTGGACGCG GTGCGCGCGC AACTGGCGCA GGCGGTGGCG
GCGGACAAGC TCTCGTCGAC GCAGCTGGCG CGAGACGAGG CGCAGTTCCG TGCAGGCGGC
ATCGCGCAAT CGCAGCTCGA TGCAAGCCGC TCCAGCGCGC AGACCAACGC GCAGCGCGTG
CGTGAACTGA CCAACCAGCT GCGCATTGCC CAGTTGCCGG CGCGCAATGA CCAGATTCGC
GCGCAATCCG CACAGGTGGA GGCGGCGCGG GCCGCAGTGG CGCAGGCCCA ATGGCGGCTC
GACCAGAAAG CGCAGAAAGC TACGCAGGGC GGCCTCGTGT TCGACACGCT GTATCGCGAA
GGCGAGTGGG TCGGCGCCGG CAGCCCCGTG GTGCGCATGC TGCCGCCGGC CAATGTGAAA
GTGCGCTTCT TCGTGCCGCA AGGCGTGCTC GGCGCGCTCA AGCCGGGGCA AGCCGCGCGC
CTGCACTGCG ATGGCTGCGC TGCCGATATC AACGCCACCG TCACGTACAT CGCCACCGAA
GCCGAATACA CGCCGCCCGT CATCTACAGC AACGCGACGC GCGACAAGCT TGTCTTCATG
GTGGAAGCGC GACCCGCAGC GGCCGACGGT CCGAAGCTGC GCCCAGGCCA ACCCGTCGAG
GTGACGCTGC CATGA
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| Protein sequence | MRQALCMGRA GCWAAASAAA IVLAGCAKHD DRTYQGYVEG EFVYVASPVG GRLDHLGVQR
GQTVNAGAPL FVLESVDETA ARQQAAAQLQ GAEAQLADLN VGKRVPEVDA VRAQLAQAVA
ADKLSSTQLA RDEAQFRAGG IAQSQLDASR SSAQTNAQRV RELTNQLRIA QLPARNDQIR
AQSAQVEAAR AAVAQAQWRL DQKAQKATQG GLVFDTLYRE GEWVGAGSPV VRMLPPANVK
VRFFVPQGVL GALKPGQAAR LHCDGCAADI NATVTYIATE AEYTPPVIYS NATRDKLVFM
VEARPAAADG PKLRPGQPVE VTLP
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