Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0004 |
Symbol | |
ID | 8017627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 6417 |
End bp | 7163 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644828789 |
Product | hypothetical protein |
Protein accession | YP_002979989 |
Protein GI | 241661629 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.333332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATGAAA GCGGCGACCA CGGCTTGCAG ACGCTCGACC CGAACTATCC AGTCTTCGTG CTGGCGTTTT GCGTCTTCTA CAAACGGCAC TACAGTGAAA AAGTTGTGCC GGCGCTACAC AAGCTGAAAT TCAACCACTT TGGTCACGAC CTGGTGGTCT TGCACGAGCA TGAAATCCGC AAGGAAAAAG GGGCGTTTAA GTTCGCTAAT CGGCAGCACA AGCAGCAGTT CTTGTCAGAG CTGACCGACA TCATCGAGAT CAGCAACTTT ATATTGATCA GCTGCGTCAT CGACAAGAAG AAGCTGCGTG ACCAAGGTAA GACGGACGGC AACCCTTACC ACCTGGCGCT CGGTTTCTGC TTGGAGACCT TGTACGAACT TCTGCAGGAA AAGAATCAGG ACGGCGCGCT GACACACGTG ATTGTCGAGT GTCGCGGCAA GAAGGAAGAC AACGAACTGG AGCTTGAATT CCGGCGCATC TGCGATGGAG CAAACCGACT CGGTATCACG TTGCCCTTTG ACATCGTATT TGCCGACAAG AAGGTGGACT CCCCCGGGTT GCAGCTTGCC GATCTTGTTG CGCGCCCGGT GGGCATGCAT GTGTTGCGGC CGGAGCAAGA AAACCGAGCC TTCGAAGTCC TAAAGCGCAA GTTCTTCTGC AGCGGCGGCC GGGAGAAGCT AGGAGAAGGC TTTGAGGATT GGGGGCTGAA GATGTTTCCG CCCCCAGAAA GCGAAAAGCC CCGATGA
|
Protein sequence | MDESGDHGLQ TLDPNYPVFV LAFCVFYKRH YSEKVVPALH KLKFNHFGHD LVVLHEHEIR KEKGAFKFAN RQHKQQFLSE LTDIIEISNF ILISCVIDKK KLRDQGKTDG NPYHLALGFC LETLYELLQE KNQDGALTHV IVECRGKKED NELELEFRRI CDGANRLGIT LPFDIVFADK KVDSPGLQLA DLVARPVGMH VLRPEQENRA FEVLKRKFFC SGGREKLGEG FEDWGLKMFP PPESEKPR
|
| |