Gene Rpic12D_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0004 
Symbol 
ID8017627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp6417 
End bp7163 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content55% 
IMG OID644828789 
Producthypothetical protein 
Protein accessionYP_002979989 
Protein GI241661629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.333332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGAAA GCGGCGACCA CGGCTTGCAG ACGCTCGACC CGAACTATCC AGTCTTCGTG 
CTGGCGTTTT GCGTCTTCTA CAAACGGCAC TACAGTGAAA AAGTTGTGCC GGCGCTACAC
AAGCTGAAAT TCAACCACTT TGGTCACGAC CTGGTGGTCT TGCACGAGCA TGAAATCCGC
AAGGAAAAAG GGGCGTTTAA GTTCGCTAAT CGGCAGCACA AGCAGCAGTT CTTGTCAGAG
CTGACCGACA TCATCGAGAT CAGCAACTTT ATATTGATCA GCTGCGTCAT CGACAAGAAG
AAGCTGCGTG ACCAAGGTAA GACGGACGGC AACCCTTACC ACCTGGCGCT CGGTTTCTGC
TTGGAGACCT TGTACGAACT TCTGCAGGAA AAGAATCAGG ACGGCGCGCT GACACACGTG
ATTGTCGAGT GTCGCGGCAA GAAGGAAGAC AACGAACTGG AGCTTGAATT CCGGCGCATC
TGCGATGGAG CAAACCGACT CGGTATCACG TTGCCCTTTG ACATCGTATT TGCCGACAAG
AAGGTGGACT CCCCCGGGTT GCAGCTTGCC GATCTTGTTG CGCGCCCGGT GGGCATGCAT
GTGTTGCGGC CGGAGCAAGA AAACCGAGCC TTCGAAGTCC TAAAGCGCAA GTTCTTCTGC
AGCGGCGGCC GGGAGAAGCT AGGAGAAGGC TTTGAGGATT GGGGGCTGAA GATGTTTCCG
CCCCCAGAAA GCGAAAAGCC CCGATGA
 
Protein sequence
MDESGDHGLQ TLDPNYPVFV LAFCVFYKRH YSEKVVPALH KLKFNHFGHD LVVLHEHEIR 
KEKGAFKFAN RQHKQQFLSE LTDIIEISNF ILISCVIDKK KLRDQGKTDG NPYHLALGFC
LETLYELLQE KNQDGALTHV IVECRGKKED NELELEFRRI CDGANRLGIT LPFDIVFADK
KVDSPGLQLA DLVARPVGMH VLRPEQENRA FEVLKRKFFC SGGREKLGEG FEDWGLKMFP
PPESEKPR