4 homologs were found in PanDaTox collection
for query gene Rpic12D_0004 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_0004  hypothetical protein  100 
 
 
248 aa  509  1e-143  Ralstonia pickettii 12D  Bacteria  normal  0.333332  normal 
 
 
-
 
NC_010717  PXO_02789  hypothetical protein  47.56 
 
 
249 aa  228  5e-59  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1038  hypothetical protein  22.34 
 
 
263 aa  43.1  0.005  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0302131  n/a   
 
 
-
 
NC_011884  Cyan7425_4145  hypothetical protein  28.16 
 
 
178 aa  42.7  0.005  Cyanothece sp. PCC 7425  Bacteria  normal  0.450955  normal  0.301633 
 
 
-
 
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