Gene Rpic12D_4999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4999 
Symbol 
ID8017426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp288424 
End bp288930 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content60% 
IMG OID644828687 
Producthypothetical protein 
Protein accessionYP_002979887 
Protein GI241589862 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.232644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGT TCGCAAAAAT CGTCCGGGCA GCTTTCGTCG CTCTCGCTCT GGTTCCGTTT 
TTCGCACATG CTCAATGGTA TGGGGCAGTC AACCAAGTTG GCGAGCCGAT CTCGCGATCG
AACTCGACGT ACAACTCGGG GGATGCTCTG CGTGGTGGCG GTTCCGCAAT CCTGGGAATT
GTCATCAACG CGCGGCCGGT CGAGCTTGAC TCGGGCACCG CGCGACAGAT CTCGGCAACC
GTTGGCGGCA TTCTGGGTGT CGTCCTCGGC ATGCATCACG GCAATTCCAA CGCTGCGCCG
TTGATTGCAG GCGGTGTTGG TACGCTGGTG GGCTATGCTG CAGGTAGCGC GATCAGCAAG
ACGCCAGGCG TCGAGCTCAT AGTCCGCACC GAAGACGGCC GGATGATCCC GGTTGTTCAG
GAGGTGGGTG ATGGCAACGT CTTCCAAGCT GGTCAGGTGG TCGCAATCGT CCAGGTCAGC
GGACGTCTGC GCGTTCAACA CTTGTGA
 
Protein sequence
MKSFAKIVRA AFVALALVPF FAHAQWYGAV NQVGEPISRS NSTYNSGDAL RGGGSAILGI 
VINARPVELD SGTARQISAT VGGILGVVLG MHHGNSNAAP LIAGGVGTLV GYAAGSAISK
TPGVELIVRT EDGRMIPVVQ EVGDGNVFQA GQVVAIVQVS GRLRVQHL