Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4999 |
Symbol | |
ID | 8017426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 288424 |
End bp | 288930 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644828687 |
Product | hypothetical protein |
Protein accession | YP_002979887 |
Protein GI | 241589862 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.232644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCGT TCGCAAAAAT CGTCCGGGCA GCTTTCGTCG CTCTCGCTCT GGTTCCGTTT TTCGCACATG CTCAATGGTA TGGGGCAGTC AACCAAGTTG GCGAGCCGAT CTCGCGATCG AACTCGACGT ACAACTCGGG GGATGCTCTG CGTGGTGGCG GTTCCGCAAT CCTGGGAATT GTCATCAACG CGCGGCCGGT CGAGCTTGAC TCGGGCACCG CGCGACAGAT CTCGGCAACC GTTGGCGGCA TTCTGGGTGT CGTCCTCGGC ATGCATCACG GCAATTCCAA CGCTGCGCCG TTGATTGCAG GCGGTGTTGG TACGCTGGTG GGCTATGCTG CAGGTAGCGC GATCAGCAAG ACGCCAGGCG TCGAGCTCAT AGTCCGCACC GAAGACGGCC GGATGATCCC GGTTGTTCAG GAGGTGGGTG ATGGCAACGT CTTCCAAGCT GGTCAGGTGG TCGCAATCGT CCAGGTCAGC GGACGTCTGC GCGTTCAACA CTTGTGA
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Protein sequence | MKSFAKIVRA AFVALALVPF FAHAQWYGAV NQVGEPISRS NSTYNSGDAL RGGGSAILGI VINARPVELD SGTARQISAT VGGILGVVLG MHHGNSNAAP LIAGGVGTLV GYAAGSAISK TPGVELIVRT EDGRMIPVVQ EVGDGNVFQA GQVVAIVQVS GRLRVQHL
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