Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4982 |
Symbol | |
ID | 8017409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 272214 |
End bp | 272972 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644828670 |
Product | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein |
Protein accession | YP_002979870 |
Protein GI | 241589845 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00261395 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGAAGC TACTGATTTG CGCAGCACTC GTGATTGCCC CAGCGTTCGC CAATGCTGGG ATTGTCGATT CGGCACTCGA CAGCATCGGC ATCTGGCATG GGAGTCGTGC CGAGCAACCT ACTTCACACT CGTCGTCGGA TGTGCTGGCT CAGATTGCCG CTGCCACGTC GCAGGGCAGT CGAGCTGCCG GCTACCAGAA CACGTCATAC CAAGGGCGCA AGGGGTATCA CGGATCTCGC AGCTACAACG ACGATCAGGA CGACGGCGGT AGTGGTTCGG TCGAGAACGC TGTGACGGTG CCTGCTACGG GAACCATCGA AGTCGGATTC TCACCCAATC GATCAGCGAT GAATGTGGCG CTACACGTCG TCAAGGCTTC CACGCGATCG CTTGACATTG CCGCATACGA GTTCACCAAC AGGCGCTTCG AGAAGGCTGT CGTTGCGGCC ATGCGCCGTG GTGTGCAGGT GCGCATCGTT GTTGATGCGA AGGAGAACGT TGACAAGGCG GCATCAATCG CTGGCCGCCT GGCAGCCGCA GGCGCACAAG TCCGATACGT CGATGATGCA CCCCTGATGC ACAACAAATA CCTCATCAGC GATGGGGAGA CCGTTGGTTC AGGTTCGGCA AACTTCACCC TCAGGGCTGA CAAGCAAAAT CACGAAAACT TCCGTGCCGA CTGGCGTAAT CGCGCATTGG CTCAGCAGTA CCAAGCCGAC TTCAACGGCA TGTGGGCAAA CGGGCATCCC TGGCGCTGA
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Protein sequence | MKKLLICAAL VIAPAFANAG IVDSALDSIG IWHGSRAEQP TSHSSSDVLA QIAAATSQGS RAAGYQNTSY QGRKGYHGSR SYNDDQDDGG SGSVENAVTV PATGTIEVGF SPNRSAMNVA LHVVKASTRS LDIAAYEFTN RRFEKAVVAA MRRGVQVRIV VDAKENVDKA ASIAGRLAAA GAQVRYVDDA PLMHNKYLIS DGETVGSGSA NFTLRADKQN HENFRADWRN RALAQQYQAD FNGMWANGHP WR
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