Gene Rleg_6438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6438 
Symbol 
ID8016937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp157820 
End bp158404 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content60% 
IMG OID644828233 
Productisochorismatase hydrolase 
Protein accessionYP_002979433 
Protein GI241554220 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00665606 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCGAGG TCGGGGAATG GCGGCACCTT TGCGTCGACA TGCAGCGGAT GTTTGCCGAA 
GACACGCCGT GGCACGTTGC CTGGATGGCA CGGATCTCTC CCCAGATCGA AGAGCTGGCC
GGGCGGCATC CGTCGCGAAC GATCTTTACC CGCTTCCTGC CACCCGAGCG TGCGGACGAC
ATGCCGGGGA AATGGCGGGA TTATTACCAG AAATGGTGGA TGATGACGGG CGAACATCTT
CCGCGCGGCT TCATAGATCT CGCCCCATCG CTGGCCTCGT TGGTTCCGCC GGCAAGGCAC
TTCGACAAAC GCACTTATTC GCCTTGGATC GACGGCCGCC TGCATCCGAT CCTTCAGTCG
GAGCGGGTCG ATACGCTTGT GATAACGGGC GGTGAAACGG ATGTCTGCGT GCTTGCCACG
ACGCTCGGCG CGATCGATCT CGGCTATCGT GTCATCGTGC TGAACGACGC CGTCTGTAGC
GGCGCCGACG ATACGCATGA CGCGTCACTG GAACTTCTGC ACGATCGGTT TTCCGTGCAG
CTCGAACTCA TGGATACCGA AGAGTTTTTG AGATGCGTTG GCTAG
 
Protein sequence
MGEVGEWRHL CVDMQRMFAE DTPWHVAWMA RISPQIEELA GRHPSRTIFT RFLPPERADD 
MPGKWRDYYQ KWWMMTGEHL PRGFIDLAPS LASLVPPARH FDKRTYSPWI DGRLHPILQS
ERVDTLVITG GETDVCVLAT TLGAIDLGYR VIVLNDAVCS GADDTHDASL ELLHDRFSVQ
LELMDTEEFL RCVG