Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_2518 |
Symbol | tgt |
ID | 7976287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 2548402 |
End bp | 2549544 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644799319 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_002950479 |
Protein GI | 239827855 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00624233 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCATCAC CGATTCGTTT TGAGCTCATT AAAACATGTA AACAAACGGG TGCGCGTCTT GGAATTCTTC ATACGCCGCA CGGTTCGTTT GAAACGCCGA TGTTTATGCC GGTTGGGACA TTAGCAACTG TGAAAACATT ATCGCCGGAA GAATTAAAAG AAATGGGTGC CGGCATTATT TTGAGCAATA CGTATCATCT ATGGCTGCGG CCGGGACATG AAATCGTAAA AGAAGCCGGC GGCCTTCATT CATTTATGAA TTGGGACCGC GGCATTTTAA CCGATTCCGG CGGTTTTCAA GTGTTTAGTT TAAGTGAATT TCGGAGAATT GAGGAAGAAG GCGTATACTT CCGAAATCAT TTAAACGGAG ATAAGCTATT TTTATCTCCG GAAAAGGCGA TCGAAATACA AAATGCGCTT GGTTCAGACA TTATGATGGC GTTCGATGAA TGTCCCCCAT ATCCGGCAAC ATATGAATAT ATGAAACAGT CCGTGGAACG AACAAGCCGT TGGGCGGAGC GCTGTTTAAA AGCGCATAAG CGCCCGAATG AGCAAGGATT GTTCGGGATT GTGCAGGGCG GGGAATTCGA AGATCTTCGC AGACAAAGCG CGCAAGACTT AGTGTCGTTA GATTTTCCGG GATATGCTGT CGGCGGCTTA TCTGTTGGTG AGCCGAAAGA AGTAATGAAT CGTGTGCTCG AGTTTACGAC CCCGCTTTTG CCGGCGAATA AACCGCGTTA CTTGATGGGA GTCGGTTCGC CGGATTCGCT TATCGACGGG GCGATTCGCG GCATTGACAT GTTTGACTGT GTGCTTCCAA CACGTATTGG CCGCAATGGA ACAGTAATGA CGAGCCAGGG GCGTGTCGTC ATTAAAAATG CACAGTACGC CCGCGATTTT TCGCCGCTTG ATCCTAATTG TGACTGCTAT ACGTGCCGCA ATTATACACG CGCATATATT CGCCATCTCA TCAAATGTGA TGAAACATTT GGAATTCGTT TAACTTCTTA CCATAATGTC TATTTTTTGA TAAAATTAAT GGAGCAAGTG AGACAAGCGA TTCGCGAAGA CCGCCTTGGA GATTTTCGCG AGGAATTTTT TGAGCAATAT GGCTTTAATA AACCAAATGC GAAAAATTTT TAG
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Protein sequence | MASPIRFELI KTCKQTGARL GILHTPHGSF ETPMFMPVGT LATVKTLSPE ELKEMGAGII LSNTYHLWLR PGHEIVKEAG GLHSFMNWDR GILTDSGGFQ VFSLSEFRRI EEEGVYFRNH LNGDKLFLSP EKAIEIQNAL GSDIMMAFDE CPPYPATYEY MKQSVERTSR WAERCLKAHK RPNEQGLFGI VQGGEFEDLR RQSAQDLVSL DFPGYAVGGL SVGEPKEVMN RVLEFTTPLL PANKPRYLMG VGSPDSLIDG AIRGIDMFDC VLPTRIGRNG TVMTSQGRVV IKNAQYARDF SPLDPNCDCY TCRNYTRAYI RHLIKCDETF GIRLTSYHNV YFLIKLMEQV RQAIREDRLG DFREEFFEQY GFNKPNAKNF
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