Gene GWCH70_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_2173 
Symbol 
ID7976978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand- 
Start bp2235778 
End bp2236470 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content38% 
IMG OID644798989 
Producttype IV pilus assembly PilZ 
Protein accessionYP_002950149 
Protein GI239827525 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0287147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA TAGGGGATAC GATAATGTTA GAACCAGCAG GCGGGGAAGA GGAAAAATAT 
AAAAGCAAAG TGGCAGAAAT AAGTGACGGT TATATACATA TTAACTATCC AATTAATGTA 
AAAACAGAAA AAACTGTGTT TTTATTAAAT GGAATGCAAT TTAAAGCAAG TTTTGTTGGG 
CCGGATCATA GTCTTTATTT ATTTGAAACA GAAGTAATTG GAAAAGTGCG TCAGCCGATA 
CCAATGGTTG TTCTTTCCTA TCCAGGAGTA GATAAGTTAG TGCGCATTCA GCGTCGCCGT 
TATGTAAGAG TGGAAGCGAA TACGGATGTG GCGATTCATC CTCTCCATCA AGAATTTATG 
CCGTTTACAA CGATGACGAC TGATATTAGC GCTGGCGGAG CCGCGATCGT ATTGCCAGAG 
CATAAGCAAA AGCAGCTGCT TCCTGGAATG GTGGTAGAGG CATGGTTTGT ACTTGCTATG 
AAATCAGGAG AATATCATTA TTTAAAAGTG AAAGCAAAAA TCGTTCGTAT ATTTCAAGCG 
AAAAACAGTG ATATATATAA AGCGTCCTTA CAATTTTTGG ATGTATCTCC GCAAGATCGC 
GTACGATTGA TTCGATATAG TTTTGAACAG CAGTTAGAGA TAAGAAAAAG AGAGGAAGAT 
ATTGCGAATA AATGGCGAAA AAGCGTGGAA TAA
 
Protein sequence
MLKIGDTIML EPAGGEEEKY KSKVAEISDG YIHINYPINV KTEKTVFLLN GMQFKASFVG 
PDHSLYLFET EVIGKVRQPI PMVVLSYPGV DKLVRIQRRR YVRVEANTDV AIHPLHQEFM 
PFTTMTTDIS AGGAAIVLPE HKQKQLLPGM VVEAWFVLAM KSGEYHYLKV KAKIVRIFQA 
KNSDIYKASL QFLDVSPQDR VRLIRYSFEQ QLEIRKREED IANKWRKSVE