Gene GWCH70_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_0207 
Symbol 
ID7977950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand- 
Start bp226242 
End bp226859 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content42% 
IMG OID644797185 
ProductRhomboid family protein 
Protein accessionYP_002948404 
Protein GI239825780 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0269044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCGC GCATGGAAAA TGCCCATACA TTTTTTCGGT TTTACCCTGT CGTTTCCATC 
CTTGTCGCCC TTCACGTAGT GATTTGGTTC ACGTTTTTTT TACGCATTCC TATAGCCGAG 
CCATTATGGG AAAAAATGAT TGGTTTTAAT GCCGCTGTAC AGAACGGGGA GTATTGGCGG 
TTAGTAAGCC CGCTTGTTTT GCATGTACGG TTTGAACATA TGATCATCAA CTCCATTTCT 
CTCATTTTAT TCGGACCTGC TTTGGAAAAA ATGTTAGGGA AAAGCAAGTT TCTGCTTCTT 
TATATTGGCA GTGGAATATG CGCCAACATT GCAACATTTT TTGTTCTGCC AGCGATGTAT 
AGTCATGCTG GAGCTTCTGG GGCCATTTTC GGTCTGTTCG GCATGTATGG ATACTTGATC 
GTATTTTGCC GCGATATAAT CGAAACACAA CACGCGCGAC TTCTTTTTGC CGTCATATGT 
ATTAGCCTAT TTATCTCATT TACTGCCCCT AATGTAAATA TGGTCGCTCA CCTGTTTGGT 
TTTTTAGGCG GTGGGATCAT TGCTCCTTTC ATTTCTTCCC ATCTGCATCC ACATCAGCCT 
TTTCTTCTTC ATCGCTAA
 
Protein sequence
MFARMENAHT FFRFYPVVSI LVALHVVIWF TFFLRIPIAE PLWEKMIGFN AAVQNGEYWR 
LVSPLVLHVR FEHMIINSIS LILFGPALEK MLGKSKFLLL YIGSGICANI ATFFVLPAMY 
SHAGASGAIF GLFGMYGYLI VFCRDIIETQ HARLLFAVIC ISLFISFTAP NVNMVAHLFG 
FLGGGIIAPF ISSHLHPHQP FLLHR